Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq11 170 2e-37 seq16 114 1e-20 seq18 113 5e-20 seq15 111 2e-19 >seq11 Length=1047007 Score = 170 bits (188), Expect = 2e-37 Identities = 203/275 (74%), Gaps = 3/275 (1%) Strand=Plus/Plus Query 133168 TAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAG 133227 || ||||| ||||| ||| ||| | ||||| || | ||||||||| ||| || ||| Sbjct 556914 TATGTGTCAATGAGCAGCGAGTACGTCTCCGAATGGATGTTCTCCATCATGATCTGGAAG 556973 Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTT 133287 ||||| ||||| || ||||| | ||| ||||| | ||| |||||||| || ||| Sbjct 556974 CCGTAGAAGCATCGGGCCTCTGGGATCTGTACTTCGGATGAGAAGCGCTCGACTAGGTTT 557033 Query 133288 TCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGC 133347 |||||||||||||| || ||||||||| ||||| || ||||| |||||| ||| Sbjct 557034 TCGTTGACGATGCCATCCGAGGCGGCGAAGAAGGCGAGGACGTGGGAGATGAAGAACCGC 557093 Query 133348 TCGTTGTCGTTCAAGCGC---TCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCG 133404 |||| ||||| | ||| | ||||||| | ||||| ||||| || | |||||| Sbjct 557094 TCGTCATCGTTGAGACGCTTGTTCCAGTCGTGGAGATCCTTCGACAGATCGATCTCCTCT 557153 Query 133405 ACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | ||||| ||||| |||||||| || |||||||| Sbjct 557154 GCCGTCCAGAACGAGGCCTCGGCCTTCTTGTACAT 557188 >seq16 Length=1709166 Score = 114 bits (126), Expect = 1e-20 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || |||||||| || || ||||||||| | || || || | || Sbjct 1053550 ATGCAGATCTTCGTCAAGACGCTCACTGGAAAGACCATCACCCTTGAGGTTGAATCTTCC 1053609 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | |||| || || | ||||| ||||| ||||| | |||| Sbjct 1053610 GACACCATCGACAACG--TCAAGAGCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACC 1053667 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | || || || ||||| || |||| || || ||| ||||||| Sbjct 1053668 AGCAGCGCCTGATCTTTGCTGGAAAGCAGCTCGAAGACGGCCGAACTCTCTCTGACTACA 1053727 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||||||| | || ||||| | || || ||| || | || || Sbjct 1053728 ACATCCAAAAGGAATCCACTTTGCATCTTGTTCTCCGTCTGCGTGGTGG 1053776 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||||||||| || | || || || | | Sbjct 1053778 ATGCAGATCTTCGTCAAGACACTCACCGGCAAAACCATAACTTTGGAAGTGGAATCATCA 1053837 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || || || | || || ||||| || || | ||||| Sbjct 1053838 GACACAATCGACAACG-TCAAGTCGAAGATTCAAGATAAGGAGGGCATCCCTCCTGACCA 1053896 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| ||||| ||| |||| |||| || || ||| || ||||| Sbjct 1053897 GCAGCGCCTCATCTTCGCTGGCAAGCAGTTGGAAGACGGCCGAACGCTCTCGGATTACAA 1053956 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||| |||| |||| |||||||||||| Sbjct 1053957 TATCCAGAAGGAGTCGACCTTGCACTTGGTGCTGCGT 1053993 Score = 95.1 bits (104), Expect = 1e-14 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326 ||||| || ||||||||| | || || ||| | |||||| | | | || | | |||| Sbjct 1053346 ACGGGAAAGACCATCACCCTTGAGGTTGAGTCTTCCGACACCATCGACAATG--TCAAGA 1053403 Query 38327 AAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 || || | ||||| ||||| ||||| | ||||| ||||| || || | || || | Sbjct 1053404 GCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTGATCTTTGCTGGAA 1053463 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445 | || || || || | |||||||| |||||||||||| || ||||| | ||||| | Sbjct 1053464 AGCAACTTGAGGATGGTCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCCACGCTCC 1053523 Query 38446 ATTTGGTGCTGCGTTTGAGAGGCGG 38470 || | ||||||||| || | || || Sbjct 1053524 ATCTCGTGCTGCGTCTGCGTGGTGG 1053548 >seq18 Length=1930349 Score = 113 bits (124), Expect = 5e-20 Identities = 137/183 (75%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| || |||||| |||| || ||| | | ||||| | | Sbjct 1554063 TTCGTCAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGAGCGACACCATC 1554122 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | |||| | |||| || |||| ||||| ||||| |||||| | ||||||||||| | Sbjct 1554123 GACAACG--TCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGTC 1554180 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | || || || ||||| || || | || || || | ||||||||||||||| | Sbjct 1554181 TGATCTTTGCCGGAAAGCAGCTTGAGGATGGCCGGACTCTGAGCGACTACAACATCCAGA 1554240 Query 38431 AGG 38433 ||| Sbjct 1554241 AGG 1554243 >seq15 Length=1704560 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| |||||| ||||||| ||||| || || | ||| ||||| |||||||| Sbjct 828690 GACAAGGAGGGCATTCCCCCCGACCAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAA 828631 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||| |||||||| ||||||||||||||| ||||| |||| || || | ||||| Sbjct 828630 GACGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTGCTC 828571 Query 38457 CGTTTGAGAGGCGG 38470 ||| | | ||||| Sbjct 828570 CGTCTCCGTGGCGG 828557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172674956800