Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq20 105 8e-18 >seq20 Length=2175025 Score = 105 bits (116), Expect = 8e-18 Identities = 169/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 158422 GACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCAT 158481 ||||||||| | || | | ||| || || || | || | || | ||| || || || Sbjct 669421 GACATTGCTTTTGGGAATGCGCAGAGATTCGGCGTGCCGTTTGGCTTCGGCGGACCACAC 669480 Query 158482 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 158541 || || ||||| ||| | || ||| | |||||||| || || || | || | ||| Sbjct 669481 GCAGCTTTCTTCGCATGTAGTGAGAAGCACAAGAGAAAAATTCCGGGTCGTCTTATTGGT 669540 Query 158542 CAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 158601 | || ||| | || | |||||| || ||||||| ||||| || |||||| Sbjct 669541 CTTTCCAAGGATCGACTGGGCGACAAAGCAGCTCGACTAGCACTGCAGACGAGGGAGCAG 669600 Query 158602 CATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAAT 158661 ||||||||| |||| || ||||| || ||||||||||| || ||||| || || || ||| Sbjct 669601 CATATCAGACGAGAAAAGGCAACGAGCAACATCTGCACCGCCCAAGCTCTACTCGCCAAT 669660 Query 158662 ATG 158664 ||| Sbjct 669661 ATG 669663 Score = 91.5 bits (100), Expect = 2e-13 Identities = 173/255 (68%), Gaps = 0/255 (0%) Strand=Plus/Plus Query 159546 TATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATG 159605 |||||||||||| || || || |||||| || ||| | || ||| | | || Sbjct 670605 TATTATGATTACCTACCCTAGCACGTTTGGTGTCTTCGAACCCAAAGTCAAAGAAGCTTG 670664 Query 159606 TAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACA 159665 | | | || ||| || | || || ||||| || | ||||| ||||| | || || || Sbjct 670665 TGATCTAGTACATCAGCACGGCGGCCAGGTGTACATGGATGGCGCAAACATGAACGCCCA 670724 Query 159666 GGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAA 159725 | | || || || | || ||||| ||||| || || | ||| | || || Sbjct 670725 GATCGGCCTTTGTTCGCCCGGCGAGATCGGTGCCGATGTCTGCCACTTGAACCTTCACAA 670784 Query 159726 GACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAA 159785 ||||||||| |||||||| ||||| || || |||||||| || ||||| ||||| | || Sbjct 670785 GACATTCTGCATTCCACACGGAGGCGGTGGGCCTGGCGTGGGACCTATCGGTGTGGGCAA 670844 Query 159786 ACATCTCACACCATT 159800 || ||| | ||||| Sbjct 670845 GCACCTCGCGCCATT 670859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588051052987200