Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq16 91.5 1e-13 >seq16 Length=1709166 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 48537 TCGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCA 48596 ||||| || | || |||| |||||| || | || ||| || || ||||||||||| Sbjct 1054007 TCGCCACCACGAAGACGCAGCACCAAGTGCAAGGTCGACTCCTTCTGGATATTGTAATCC 1053948 Query 48597 GATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTG 48656 || || |||| |||| ||||||||||| || || || || || ||||| || || | Sbjct 1053947 GAGAGCGTTCGGCCGTCTTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCAGGA 1053888 Query 48657 GGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCC 48716 || | ||||||||| || |||||| || || | | | ||||| | ||| Sbjct 1053887 GGGATGCCCTCCTTATCTTGAATCTTCGACTTGACGTTGTCGATTGTGTCTGATGATTCC 1053828 Query 48717 ACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||| || || ||||| || || | || || || || |||||||| Sbjct 1053827 ACTTCCAAAGTTATGGTTTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 1053778 Score = 87.8 bits (96), Expect = 1e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||| | ||| |||||| ||| || ||||| ||||| || || || | ||| Sbjct 1053539 AGACGCAGCACGAGATGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGA 1053480 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||||| || ||||| ||||| ||||| || || | |||| ||||||| Sbjct 1053479 CCATCCTCAAGTTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGAATGCCCTCC 1053420 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || ||| | | | || || | ||| ||||| | || Sbjct 1053419 TTGTCCTGAATCTTGCTCTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCAAGGGTG 1053360 Query 48729 ATCGTTTTTCCCGTCA 48744 || || |||||||||| Sbjct 1053359 ATGGTCTTTCCCGTCA 1053344 Score = 86.0 bits (94), Expect = 5e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || ||||| || ||||| ||||| ||| |||| |||| || | |||||| || ||||| Sbjct 1053740 TCCTTTTGGATGTTGTAGTCAGAGAGAGTTCGGCCGTCTTCGAGCTGCTTTCCAGCAAAG 1053681 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||||| ||||| || || | |||| |||||||||||| |||||| Sbjct 1053680 ATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTT 1053634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937507146460