Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq20 208 1e-48 seq11 178 2e-39 >seq20 Length=2175025 Score = 208 bits (230), Expect = 1e-48 Identities = 1102/1730 (64%), Gaps = 55/1730 (3%) Strand=Plus/Plus Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATC 212755 ||| || ||||| || || ||||| | | | ||| || ||||| | | ||| | Sbjct 1764495 GTTGAGCGACTGCGATTGATCGATGAAAGCACCACGGTCGGCAGCCATCTGCACGATCTG 1764554 Query 212756 TCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGG 212815 | |||| || |||||| || |||||| | | | | |||||||| || |||| | || Sbjct 1764555 GCGCTGGCTGATCTCCCAAACAGTCTTGTACAATGCCTTGAGGTCATCGGGGATGTTAGG 1764614 Query 212816 GATGTTCTGCACAGACCCCCTGTGTATGGTCAGCTGCAGGCG--CATGTCCTCGTTCCAG 212873 ||| ||| | || || |||| | | | ||| | ||||| ||| ||| Sbjct 1764615 AATGCGCTGGATGGATCCACTGTCGGCGATGA--TGCGGTTCTTCATGTTGTCGGACCAC 1764672 Query 212874 AGGCCCCTGGTCTCCAGGCAC-TTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGA 212932 ||||| | |||| || | | |||| || ||||||||| | ||||| || |||| Sbjct 1764673 AGGCCAC-GGTCGACAAGATCCTTGAGCAACCAAGGGTTGACCACTTGGAACTCGCCTGC 1764731 Query 212933 GAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAG 212992 | || | | | ||| | ||| |||||||| ||||||| || ||| ||| |||| Sbjct 1764732 CAAGACACGGCGCGAGTAGATGTTAGAAGTGTAAGGCTCGAAGCACTCATTGAATCCCAT 1764791 Query 212993 AATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTG 213052 ||||| | || || || ||||| || || || || ||| ||| | || || || Sbjct 1764792 GATCTGCGAGGTAGAAGCAGTCGGCATAGGGGCAACGAGAAGAGAGTTGCGGACACCATG 1764851 Query 213053 CTCGCCGATGAGGCGCCG-AAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCT 213111 || | |||| | | |||||||||| | ||||| |||| ||| || Sbjct 1764852 CTGGGCGATCTTGTCCTTCAAGCTCTGCCAA-TCCCA-----CAGATCGGTGGGAGTGA- 1764904 Query 213112 TCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGG 213171 ||| ||||||||| |||||| ||| ||| ||||| |||| ||| | Sbjct 1764905 -CACC--CCACATGTCGTACTGCAGCTCGCCCTTGGAAACGGGAGAACCCTCGTATGTTT 1764961 Query 213172 AGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGG 213231 || || || ||| ||| || || ||||| ||||| || ||||||| |||||||| Sbjct 1764962 CATAAGGCCCGAGCTGCTTTGCGAGGTCGCACGACGCGGTAAGTGCAGCGTGGTAGATGG 1765021 Query 213232 TTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGC 213291 | || || |||| ||||||||| ||||| ||||| ||| ||||| || Sbjct 1765022 TCTCGAAGATCTGGATGTTGAGCTGGCGAGCCTCGGGGGAGTCGAAAGGCATGCGCAGAG 1765081 Query 213292 GTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAG 213351 ||| |||| || || || | ||| || | |||||||| | || | | ||| | Sbjct 1765082 CCAAGAAGGCATCCGCGAGACCATTGACACCCAGACCGATGGGGCGATGACGGAAGTTGG 1765141 Query 213352 ACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGG 213411 |||| ||| || |||||| ||| || |||||||||||| | ||| | Sbjct 1765142 ACTTCTTTGCCTCAGGCACGGGGTAGTGGTTCAGGTTGATGATCTTGTTCAAGTTCTTGA 1765201 Query 213412 TGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGC- 213470 | | || | |||||| | | || | || | | | || | || || | ||| | Sbjct 1765202 CGACAACCTGGGTGACCTCGTGGAGCTTCTTGA-AGTCAA-AGGTCTCCTCGGTCATATC 1765259 Query 213471 -ACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGT 213529 || | || ||||| | |||| |||||| ||||| ||||| | | | || Sbjct 1765260 GACGTAGGTGGGTAGGGCCAGCGACGCCAAGTTGCACACGGCGACCTCATCCGGAGCAGT 1765319 Query 213530 GTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTT 213589 |||||| | ||||| ||||| || ||| || |||||| || ||||||| ||||| Sbjct 1765320 GTACTCGACAATCTCTGTGCAGAGATTGGAGCTGCGGATGACACCGAGGTTCTTCTGGTT 1765379 Query 213590 TGACTTTGCGTTGGCA-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGG 213648 ||| ||| | ||| | |||||||||||||||| ||||| |||||||| ||| | Sbjct 1765380 GCTCTT-GCGATTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCGGTCTCGGTCTGAG 1765438 Query 213649 ACACCAGTATCTGGCT--CCAGAGGTACCTGGCCTTGACCACCCGCC-TGACAGCTCCGG 213705 | | || || ||| ||| || | | ||| ||| || || ||| Sbjct 1765439 CCTCGAGGAT--GGCATACCACAGCTTC-------TGAGCACGGATGGTGTCACGACCGC 1765489 Query 213706 G-CGTAGC--CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCA 213762 | | | | |||||| | || ||||| || | ||| |||| || | || | | | Sbjct 1765490 GACCTTCCTTCTCGTAGCGCTCATAGAGTTCTTCGAACTCGTCACCATAAACATCGGCAA 1765549 Query 213763 GTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCAT-CTCTGACTCTCTGC 213821 | || || || ||| ||||| || ||||| |||| | ||| ||| | || | Sbjct 1765550 GACCAGGGCACTCGTTGGGGCACATCAGCGTCCAGGTGCCGTTCTGCTC-GACACGCTTC 1765608 Query 213822 ATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACT 213881 ||||||| ||| |||| |||||| ||| |||||| || | | | ||| ||| Sbjct 1765609 ATGAACAAGTCGGGGATCCACAGGGCGTAGAACAGATCACGAGCGCGGACCTCCTCCTTG 1765668 Query 213882 CCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAG 213941 || ||| || | || || || || || | ||||| ||||||||||||| |||| Sbjct 1765669 CCGTGGTTCTTCCTGAGGTCGAGGAACGAGAACACATCCGCATGCCACGGCTCCACGTAG 1765728 Query 213942 ATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTG 213998 ||||| || || || || | |||| || || ||||| || | ||| ||||| Sbjct 1765729 ATGGCGAAAGCTCCGGGACGCTTGTTGCCACCTTGGTCAACATAGCGGGCAGTGTTGTTG 1765788 Query 213999 AAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGT-CCGTTGGTTCCCGCTATATACGA 214057 |||| ||| || | ||| || || || || || ||| ||||| || || | || ||||| Sbjct 1765789 AAGACGCGGAGCATGGGCACAAGACCATTTGA-TGTGCCGTTAGTGCCTCCGATGTACGA 1765847 Query 214058 GCCGGAGGCCCTCAG--GTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATC 214115 |||| || | | | || | | ||| || |||||||| |||| |||||||||| Sbjct 1765848 ACCGGTAGCACGGATACGGTGAACGTTCAGA--CCGATGCCACCAGCGTTCTTGGAGATC 1765905 Query 214116 ATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGC 214175 || |||||| | | | || || ||||| | |||||||| || | | || | Sbjct 1765906 ATAGCGCAGGTCTTGAGGGTGTCATAAATGCCATCGATGCTGTCCTCCTTCATGTCGATG 1765965 Query 214176 AAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCA 214235 | |||||| | |||||| || | | || |||| | |||| ||||| ||| ||| Sbjct 1765966 AGGAAGCAAGAGGCGAGCTGAGGGTTCGGCGTACCAGCGCTGAAGAGCGTAGGGGAGGCG 1766025 Query 214236 TGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGC 214295 || | | ||||||| || | | |||| ||||| | | | | |||||| | Sbjct 1766026 TGCGTGAAGTACTTGTTCGACATGTAGTTGTATGTCTCAATGGCGGCTTCGATGTCCTCG 1766085 Query 214296 TTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTG 214355 |||||| | |||| | ||| | ||| || || |||| || || | ||| Sbjct 1766086 CCGTGGATACCGACAGCGACACGCATGATCATCTGTTGTGGCCGTTC---GGCCACCTTG 1766142 Query 214356 GGGCC---CTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTA 214402 | | ||||||| ||||| ||||| || ||||||||||| ||||| Sbjct 1766143 CCATCAATCCTGAGCAGATAGGAACGCTCGAGGGTCTTGAACCCGAAGTA 1766192 >seq11 Length=1047007 Score = 178 bits (196), Expect = 2e-39 Identities = 350/516 (68%), Gaps = 9/516 (2%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| ||||| | ||||| |||||||| ||||| || | |||||||||||| Sbjct 556299 CTGGTAGTCACCCACGCGCTTCTCGAAGAAGTTCGTCTTGCCTGATAGCGAGATGTTCTC 556358 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958 ||| ||| ||| || ||| ||| || || | ||| | || |||| || Sbjct 556359 CATAAAGTCGAACGGATTGCTAACGTTGTAGTACCTTTGATTGCCGA---GTGCCAGGAG 556415 Query 47959 GTGA---TCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAG 48015 | || || || ||| |||| ||||| | | |||||| | ||||||||| | || Sbjct 556416 GAGACGGTCAGCCACGAACTCAATGTACTGTCTCATGAGATTCGAGTTCATGCCAAGCAG 556475 Query 48016 GGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAAT 48075 | || || | ||| | || || ||||| | ||| ||| |||||||| | || Sbjct 556476 TGCTACAGGGAGAGCGTCCGTCAGGAACTCTTGCTCAATCGTGACGGCTTCAGTGATGAT 556535 Query 48076 CTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGC 48135 | | || || ||| ||||| |||||| | | |||| |||||| Sbjct 556536 GTCTTGGACCAATTGCTGGTCGGGCTTGTTCTTGAGGTGCGAGA---ACAGCAAGCAGGC 556592 Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195 |||||| |||||| ||| ||||| || ||||||| |||||||||| |||||||| Sbjct 556593 AAAGTCAGTGTGCATGCCCTCGTCACGCGAGATGAGCTCGTTGGAGAAAGTGAGACCAGC 556652 Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255 ||||| || | || ||||||||||| ||||| || || ||||| ||||||||| || Sbjct 556653 CATGAGGCCACGCTTCTTGAGCCAGAAGATTGCTGCAAAGGAGCCGCTGAAGAAGATACC 556712 Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCA 48315 ||| || || ||||| || | | | | || | | ||| | || |||||||| Sbjct 556713 CTCTACGGCGGCGAATGCAATCAATCGGCAAGCAAACGTGGAGTTGTCATCCGAGATCCA 556772 Query 48316 GGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 || ||||||||||||||||| ||||||||||| Sbjct 556773 TCGGAGAGCCCAGTCTGCCTTCTTTTTGATGCATGG 556808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532567116800