Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq20 232 1e-55 seq11 113 8e-20 >seq20 Length=2175025 Score = 232 bits (256), Expect = 1e-55 Identities = 710/1081 (66%), Gaps = 45/1081 (4%) Strand=Plus/Plus Query 221403 GGGCGCAAGACTGCGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTC 221462 || |||| ||| || || |||||||||||||||||||| |||||| ||||||| | Sbjct 1764986 GGTCGCACGACGCGGTAAGTGCAGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAG-C 1765044 Query 221463 TCTTG-GCCTCGGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCC 221521 | | |||||||| || ||| ||||| ||||| | ||| | || || || || Sbjct 1765045 TGGCGAGCCTCGGGGGAGTCGAAAGGCATGCGCAGAGCCAAGAAGGCATCCGCGAGACCA 1765104 Query 221522 TGTACTCCGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGA 221581 | || || | ||||||||| | || | |||||| || || |||||||| Sbjct 1765105 TTGACACCCAGACCGATGGGGCGATGACGGAAGTTGGACTTCTTTGCCTCAGGCACGGGG 1765164 Query 221582 TAAAAGTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACC------ACC 221635 || ||| | || ||| | ||||| | |||| ||| ||| |||| ||| Sbjct 1765165 TAGTGGTTCAGGTTGATGATCTTGTTCAAGTTCT---TGACGAC---AACCTGGGTGACC 1765218 Query 221636 TCGGTCAGCTTCTGGTGATTGAACACCAAC-TCGCCGCCGTCGTGGAGGGGTTCCACAAA 221694 ||| ||||||| |||| | || || || | ||| | || || | Sbjct 1765219 TCGTGGAGCTTCT------TGAAGTCAAAGGTCTCCTCGGTCATA-------TCGACGTA 1765265 Query 221695 AGCGTTTAGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTG 221754 | | |||||| | |||| ||| |||||||| ||||| ||| || |||| Sbjct 1765266 GGTGGGTAGGGCCAGCGACGCCAAGTTGCACACGGCGACCTCATCCGGAGCAGTGTACTC 1765325 Query 221755 TATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTT 221814 | |||||||| ||||| ||| || |||| || |||| || || || ||| Sbjct 1765326 GACAATCTCTGTGCAGAGATTGGAGCTGCGGATGACACCGAGGTTCTTCTGGTTGCTCTT 1765385 Query 221815 GCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAG 221874 ||||||| ||| |||||||||||||| ||||| || ||||| ||||||| | || Sbjct 1765386 GCGATTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCGGTCTCGGTCTGAGCCTCGAG 1765445 Query 221875 AATCTTGTCCCAGAGTTCTCTG-GCGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTTT 221932 || | ||| || | |||| || | | || || ||| || ||| || ||| Sbjct 1765446 GATGGCATACCACAGCT-TCTGAGCACGGATGGTG-TCACGACCGCGACCTTC---CTTC 1765500 Query 221933 TCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACAC 221992 || || | |||||| || |||| ||||| || | ||| | || || || ||| Sbjct 1765501 TCGTAGCGCTCATAGAGTTCTTCGAACTCGTCACCATAAACATCGGCAAGACCAGGGCAC 1765560 Query 221993 CTGGCGGGACACATCAGACTCCAG-TGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTC 222051 | ||| |||||||| ||||| ||| ||| | | ||| | || |||||| | ||| Sbjct 1765561 TCGTTGGGGCACATCAGCGTCCAGGTGCC-GTTCTGCTCGACACGCTTCATGAACAAGTC 1765619 Query 222052 CGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTT 222111 ||||||||||| || | || ||||| | | || ||||||| ||||| ||| || Sbjct 1765620 GGGGATCCACAGGGCGTAGAACAGATCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTT 1765679 Query 222112 CCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGC 222171 ||| || || | ||| || | || || ||||||||||||| |||| ||| | ||| Sbjct 1765680 CCTGAGGTCGAGGAACGAGAACACATCCGCATGCCACGGCTCCACGTAGATGGCGAAAGC 1765739 Query 222172 GCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAA 222230 ||||| |||||||||||||| || | || ||| ||| | |||||||| ||| | Sbjct 1765740 TCCGGGACGCTTGTTGCCACCTTGGT-CAACATAGCGGGCAGTGTTGTTGAAGACGCGGA 1765798 Query 222231 GGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCC 222290 | | || || || || || ||| ||||| ||||| ||||||| |||| || | Sbjct 1765799 GCATGGGCACAAGACCATTTGATGTGCCGTTAGTGCCTCCGATGTACGAACCGGTAGCAC 1765858 Query 222291 TCAGGTTACTG---GCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGC 222347 || ||| | | || ||||| ||||| |||| || |||||||| |||||| Sbjct 1765859 ---GGATACGGTGAACGTTCAGACCGATGCCACCAGCGTTCTTGGAGATCATAGCGCAGG 1765915 Query 222348 TCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAG 222407 ||||||| ||||| ||||| || || ||||||||| | || | || || |||| Sbjct 1765916 TCTTGAGGGTGTCATAAATGCCATCGATGCTGTCCTCCTTCATGTCGATGAGGAAGCAAG 1765975 Query 222408 ACGACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGT 222467 | | | ||||| || | | || ||| | || ||||| || |||||| || |||| Sbjct 1765976 AGGCGAGCTGAGGGTTCGGCGTACCAGCGCTGAAGAGCGTAGGGGAGGCGTGCGTGAAGT 1766035 Query 222468 A 222468 | Sbjct 1766036 A 1766036 >seq11 Length=1047007 Score = 113 bits (124), Expect = 8e-20 Identities = 287/438 (66%), Gaps = 11/438 (3%) Strand=Plus/Minus Query 25888 GCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTC 25947 || || || || || ||||| ||||| |||||||| || ||||| || |||||||||||| Sbjct 556730 GCATTCGCCGCCGTAGAGGGTATCTTCTTCAGCGGCTCCTTTGCAGCAATCTTCTGGCTC 556671 Query 25948 AAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGA 26006 ||| || || |||| | || || ||||| ||||||||||||||| | ||||| Sbjct 556670 AAGAAGCGTGGCCTCATGGCTGGTCTC-ACTTTCTCCAACGAGCTCATCTCGCGTGACGA 556612 Query 26007 GGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTC 26066 ||| | |||| || ||||||||| |||| | | || ||| | |||| || Sbjct 556611 GGGCATGCACACTGACTTTGCCTGCTTGCTGTTCTCG---CACCTCAAGAACAAGCCCGA 556555 Query 26067 TCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNN 26126 || | ||| | ||||||| || || || ||| ||| | ||||| | Sbjct 556554 CCAGCAATTGGTCCAAGACATCATCACTGAAGCCGTCACGATTGAGCAAGAGTTCCTGAC 556495 Query 26127 NNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGA 26186 | ||||||||| | |||||||| || |||||||| Sbjct 556494 GGACGCTCTCCCTGTAGCACTGCTTGGCATGAACTCGAATCTCATGAGACAGTACATTGA 556435 Query 26187 GTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGACTCTACA--GTACGCC 26243 || ||||| |||| ||| || || || || | || || ||||| || || Sbjct 556434 GTTCGTGGCTGACCGTCTCCTCCTGGCACTCGGCAATC-AAAGGTACTACAACGTTAGC- 556377 Query 26244 TAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAA 26303 || ||||||||||||||||| ||||| ||| | ||| ||||| |||||||| || || Sbjct 556376 -AATCCGTTCGACTTTATGGAGAACATCTCGCTATCAGGCAAGACGAACTTCTTCGAGAA 556318 Query 26304 GAGGGTCGGCGACTATCA 26321 | | || || ||||| || Sbjct 556317 GCGCGTGGGTGACTACCA 556300 Score = 87.8 bits (96), Expect = 3e-12 Identities = 168/244 (69%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 25467 ACAC-AAAGATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAG 25525 |||| ||| | || ||| |||||||||||||||| | ||| |||||| || || | Sbjct 557208 ACACGAAACAGATCTGGCAGATGTACAAGAAGGCCGAGGCCTCGTTCTGGACGGCAGAGG 557149 Query 25526 AGATTGATCTGGCCAAGGACATGGACGGCTGGTAC--GC-TCTATCCAAAGACGAGCAGC 25582 |||| |||||| | ||||| | ||| |||| || || ||| | | ||||||| | Sbjct 557148 AGATCGATCTGTCGAAGGATCTCCACGACTGGAACAAGCGTCTCAACGATGACGAGCGGT 557089 Query 25583 ATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATC 25642 || || |||| | || ||||| || ||||| ||||| || || ||||| || | Sbjct 557088 TCTTCATCTCCCACGTCCTCGCCTTCTTCGCCGCCTCGGATGGCATCGTCAACGAAAACC 557029 Query 25643 TGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCC 25702 | |||| | ||| | ||||| ||| | |||||| || |||||||| |||| Sbjct 557028 TAGTCGAGCGCTTCTCATCCGAAGTACAGATCCCAGAGGCCCGATGCTTCTACGGCTTCC 556969 Query 25703 AGAT 25706 |||| Sbjct 556968 AGAT 556965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844567788800