Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq16 114 8e-20 >seq16 Length=1709166 Score = 114 bits (126), Expect = 8e-20 Identities = 160/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATG--AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGA 480608 ||| |||||||| |||||||| ||||| | || |||| | | || || |||| ||| Sbjct 1053771 ACGCAGACGGAGAACAAGATGCAAAGTGGA-TTCCTTTTGGATG-TTGTAGTCAGAGAGA 1053714 Query 480609 GTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATT 480668 |||| | ||||| || |||||||||||||| || || || || || ||||||||||| Sbjct 1053713 GTTCGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGAATG 1053654 Query 480669 CCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCA 480728 || |||||||| |||||||| ||||| || || || || | | | ||| Sbjct 1053653 CCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATGGTGTCGGAAGATTCAACCTCA 1053594 Query 480729 AGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || || ||||| ||||| ||||| || || Sbjct 1053593 AGGGTGATGGTCTTTCCAGTGAGCGTCTTGACGAAGATCTG 1053553 Score = 89.7 bits (98), Expect = 3e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| |||||||||||||||||||| || ||||| || || ||||||||||| || ||||| Sbjct 1053477 ATCCTCAAGTTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTT 1053418 Query 480677 GTCTTGAATCTT 480688 ||| |||||||| Sbjct 1053417 GTCCTGAATCTT 1053406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268178342102960