Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq16 87.8 3e-12 >seq16 Length=1709166 Score = 87.8 bits (96), Expect = 3e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | || || || || ||||| | || | ||| || ||| || |||||| Sbjct 1053551 ATACCACCACGCAGACGCAGCACGAGATGGAGCGTGGACTCCTTCTGAATGTTGTAGTCG 1053492 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | | ||| || | ||| ||||| ||||| || | | ||| || |||||| Sbjct 1053491 GACAGGGTGCGACCATCCTCAAGTTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGA 1053432 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || || || || || || ||| | || | ||| || || |||||||||||| Sbjct 1053431 GGAATGCCCTCCTTGTCCTGAATCTTGCTCTTGACATTGTCGATGGTGTCGGAAGACTCA 1053372 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGT 193336 || || || || || || || || || Sbjct 1053371 ACCTCAAGGGTGATGGTCTTTCCCGT 1053346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899654175086400