Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq11 93.3 1e-13 seq9 84.2 6e-11 >seq11 Length=1047007 Score = 93.3 bits (102), Expect = 1e-13 Identities = 360/555 (65%), Gaps = 23/555 (4%) Strand=Plus/Plus Query 155592 GACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGC--TGTATTCTACAATCTCACAGC 155649 || ||||||||||| || || | || | || || |||| || | |||||| || Sbjct 148312 GATGCCAGATTACAAACGGCGATTTCGTC--CGGAGCAGTGTACTCGATTATCTCAGTGC 148369 Query 155650 ACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCAT 155709 | || || || |||| |||| ||| | ||||| ||||| ||| | |||||| |||| Sbjct 148370 AGAGATTCGAGCTCTGGATGACGCCAAGGTTCTTTTGGTTGCTTTTGCGGTTACAGGCAT 148429 Query 155710 CCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAGA 155769 ||||||| || ||||| || || || ||||| | || ||||||||||| |||| | Sbjct 148430 CCTTGTAGAGCATGTACGGAGTGCCAGTCTCAACTTGGGCGTCCAGAATTGCACGCCATA 148489 Query 155770 GGTCACGGGCATTAATTTGCTTGTTGTATCTGCC-TTCCGACTCATAT--TTCATATACA 155826 || | || ||| | || || ||| |||| ||||||| ||| |||| Sbjct 148490 GGATGTGAGCGGGAATGGTCCTG-CGTCCACGCCTTTCCTTCTCATATCGTTC--GTACA 148546 Query 155827 GCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACA 155886 |||| |||| | |||||| |||| ||| || ||||| | || ||||| | || Sbjct 148547 GCGTCTCAAAATCTTGTCCGTAAACATCAGGCAGCCCCGGGCATTCGTCCGGGCACATCA 148606 Query 155887 GCGACCAAATTT--TATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGC 155944 || |||| || | || | | || |||| ||| || | | | ||| | || Sbjct 148607 ACGTCCAATCTTCGTTTTGCTCA--ACGCGCTTCATGAACAGGTTAGGGATCCAGAGTGC 148664 Query 155945 ATAGAAAAGGTCCCTTGC---CTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAA 156001 || ||||| || | || ||| || || | |||||||||||| || || |||| Sbjct 148665 ATTAAAAAGATCGCGGGCACGATTT---TCTTCTTTGCCGTGATTCTTGCGAAGGTCTAG 148721 Query 156002 GAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCC---T 156058 ||| | | ||| | || ||||||| || | ||||| ||| | | Sbjct 148722 GAAAGCAAACACATCCGCGTGCCAGGGCTCCAAGTATACGGCAAATGCTCCAGGGCGTTT 148781 Query 156059 CTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAAT 156118 || || || ||||| |||| |||||||| | ||||||| || ||||| || | | Sbjct 148782 GTTTCCCCCTTGATCAGCATAACGAGCAGTGTCGTTGAAGATACGAAGCATTGGGACCAG 148841 Query 156119 ACCATTGGAAGTGCC 156133 ||||| |||||||| Sbjct 148842 GCCATTCGAAGTGCC 148856 >seq9 Length=1017554 Score = 84.2 bits (92), Expect = 6e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 60164 GCTGCGTCCTTGCCACCCATAAGACGGGTTCCAAATTGTCCGTTTGGCTGGAATAGATTA 60223 || ||||| ||||||||| |||||| | || || | ||| |||||| || | ||| Sbjct 577758 GCAGCGTCGTTGCCACCCTGAAGACGAGAACCGAAGTTTCCACTTGGCTCGAGTGTATTG 577699 Query 60224 ATGTTGTTAGAGCCTACGAAATTTTGAGCGAGACCAACAAT 60264 ||||| || || || |||||||||||||| ||||||||||| Sbjct 577698 ATGTTATTGGATCCGACGAAATTTTGAGCAAGACCAACAAT 577658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817222846740