Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq20 134 2e-25 seq11 109 7e-18 seq15 86.0 8e-11 >seq20 Length=2175025 Score = 134 bits (148), Expect = 2e-25 Identities = 184/257 (72%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 ||||| || ||||| || |||| ||| |||||||||||||||||||| || || || || Sbjct 1765762 TGGTCAACATAGCGGGCAGTGTTGTTGAAGACGCGGAGCATGGGCACAAGACCATTTGAT 1765821 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 |||||| ||||| | | ||| | |||| || || | ||| || | ||| Sbjct 1765822 GTGCCGTTAGTGCCTCCGATGTACGAACCGGTAGCACGGATACGGTGAACGTTCAGACCG 1765881 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245 ||||| || || ||||||||| | ||||| ||||| ||||| || ||||| ||| Sbjct 1765882 ATGCCACCAGCGTTCTTGGAGATCATAGCGCAGGTCTTGAGGGTGTCATAAATGCCATCG 1765941 Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305 || ||| |||||||||| | ||| ||||| || | | || |||| || ||| || Sbjct 1765942 ATGCTGTCCTCCTTCATGTCGATGAGGAAGCAAGAGGCGAGCTGAGGGTTCGGCGTACCA 1766001 Query 1630306 GCGTTGAAGAGCGTGGG 1630322 ||| |||||||||| || Sbjct 1766002 GCGCTGAAGAGCGTAGG 1766018 Score = 113 bits (124), Expect = 6e-19 Identities = 89/107 (83%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 |||||||||||| | || ||||| |||| | || | || |||||| | ||||||||| Sbjct 96222 GCCGCCAACTACATGGATATCAAAGCTCTCTTGGACGTCGGATGCAAGACCGTGGCCAAC 96281 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACAT 1592292 ||||||||||||||||| || ||||||||||||||||| || ||||| Sbjct 96282 ATGATCAAGGGCAAGTCTCCAGAGGAGATCCGCAAGACGTTCAACAT 96328 Score = 87.8 bits (96), Expect = 2e-11 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524 ||||||| ||||| || || || || || ||| ||||||||||||||||||||| ||| Sbjct 1765625 TCCACAGGGCGTAGAACAGATCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTCCTGA 1765684 Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 1628584 ||||||| | || | || || ||||||||||||| |||| ||| || || || Sbjct 1765685 GGTCGAGGAACGAGAACACATCCGCATGCCACGGCTCCACGTAGATGGCGAAAGCTCCGG 1765744 Query 1628585 TGCGCTTGCCGCCGCC 1628600 |||||| ||| || Sbjct 1765745 GACGCTTGTTGCCACC 1765760 >seq11 Length=1047007 Score = 109 bits (120), Expect = 7e-18 Identities = 214/314 (68%), Gaps = 2/314 (1%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || ||||||||| |||||| ||||| |||||||| |||||||| Sbjct 556294 GCCTTCTGGTAGTCACCCACGCGCTTCTCGAAGAAGTTCGTCTTGCCTGATAGCGAGATG 556353 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | |||||| ||| ||||||| | ||| ||||| | | | Sbjct 556354 TTCTCCATAAAGTCGAACGGATTGCTAACGTTGTAGTACCTTTGATTGCCGAGTGCCAGG 556413 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || || ||||| || || ||||| |||||||| | |||||| | ||||||||| | Sbjct 556414 AGGAGACGGTCAGCCACGAACTCAATGTACTGTCTCATGAGATTCGAGTTCATGCCAAGC 556473 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || || || | || ||| ||||||| ||| ||| |||||| || |||| Sbjct 556474 AGTGCTACAGGGAGAGCGTCCGTCAGGAACTCTTGCTCAATCGTGACGGCTTCAGTGATG 556533 Query 868931 ATCTGCCTGGGCACGTCGGCCGA-GGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAGGC 868989 || | | ||| | | | | ||||||||| ||| || | | |||| |||||| Sbjct 556534 ATGT-CTTGGACCAATTGCTGGTCGGGCTTGTTCTTGAGGTGCGAGAACAGCAAGCAGGC 556592 Query 868990 AAAGTCGCAGTGCA 869003 |||||| ||||| Sbjct 556593 AAAGTCAGTGTGCA 556606 >seq15 Length=1704560 Score = 86.0 bits (94), Expect = 8e-11 Identities = 129/181 (71%), Gaps = 3/181 (2%) Strand=Plus/Minus Query 1726973 TCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCG 1727032 || |||||| || |||||||||||| || || || || ||||||||||||| |||||| Sbjct 406009 TCCGGGTCGTTGATCAGGCCCTTCCATCCCACCGTTGTCCGCGGCTTTTCGAGGTAGGCG 405950 Query 1727033 CGCATGACCACGCAAAGCGCGTCGCCGACCTCGTCTCGGACAAAGGCGCGCAGGCGTCGG 1727092 ||||||| ||||| | | ||| || || | |||| || || | | || || | Sbjct 405949 CGCATGATGACGCACAAGTCCTCGTTGAGCT--TGTCGGCCAGAGCCTTG-AGCCGCGAG 405893 Query 1727093 CCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGACCAACGATAACCAGCAGC 1727152 | || |||| ||| || |||||||| ||| || || || || || ||||||||| Sbjct 405892 CAGTACTCGATAGCGGTGGCGGGGTCGTGGAGCGAGCAGGGTCCGACCATGACCAGCAGC 405833 Query 1727153 C 1727153 | Sbjct 405832 C 405832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107137558706340