Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq20 158 1e-33 seq16 98.7 9e-16 seq18 87.8 2e-12 >seq20 Length=2175025 Score = 158 bits (174), Expect = 1e-33 Identities = 468/708 (66%), Gaps = 23/708 (3%) Strand=Plus/Plus Query 139312 TCGTAGAGTTCGTCGAA-TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGG 139370 || |||||||| ||||| |||| |||| || | || | |||| | | |||| || || Sbjct 1765510 TCATAGAGTTCTTCGAACTCGT-CACCATAAACATCGGCAAGACCAGGGCACTCGTTGGG 1765568 Query 139371 ACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCA 139430 ||||| |||| ||| ||||||| || ||| ||| ||||||||| || || ||||| Sbjct 1765569 GCACATCAGCGTCCAGGTGCCGTTCTGCTCGACACGCTTCATGAACAAGTCGGGGATCCA 1765628 Query 139431 CAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTT 139490 || ||| | | || ||| || || || ||| || ||| | | || Sbjct 1765629 CAGGGCGTAGAACAGATCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTC 1765688 Query 139491 AAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG 139550 ||||| || || || || ||||| || |||| |||||||| | || || || Sbjct 1765689 GAGGAACGAGAACACATCCGCATGCCACGGCTCCACGTAGATGGCGAAAGCTCCGGGACG 1765748 Query 139551 TTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTC 139607 ||| |||||||| || || | || ||| || ||||| ||||| | ||| ||| | Sbjct 1765749 CTTGTTGCCACCTTGGTCAACATAGCGGGCAGTGTTGTTGAAGACGCGGAGCATGGGCAC 1765808 Query 139608 CAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG---GGACTGTTGCGAGCTCGGACGTC 139664 ||||| | | ||| ||||| |||| | |||| | || | | ||| |||| Sbjct 1765809 AAGACCATTTGATGTGCCGTTAGTGCCTCCGATGTACGAACCGGT---AGCACGGATACG 1765865 Query 139665 ATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATG 139723 || || || | ||||| || || | ||||| || | | |||| || | | | Sbjct 1765866 GTGAACGTTCAGACCGATGCCACCAGCGTTCTTGGAGATCATAGCGCAGGTCTTG-AGGG 1765924 Query 139724 TCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTT 139783 | || || || || |||||||| |||| ||| || || ||||| || | || | Sbjct 1765925 TGTCATAAATGCCATCGATGCTGTCCTCCTTCATGTCGATGAGGAAGCAAGAGGCGAGCT 1765984 Query 139784 GCGGTAGTTT--CGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA-CATTTGTT 139840 | || ||| ||| || || || || ||||| ||||||||||| | ||| | Sbjct 1765985 GAGG--GTTCGGCGTACCAGCGCTGAAGAGCGTAGGGGAGGCGTGCGTGAAGTACTTG-T 1766041 Query 139841 TCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAG 139900 ||||||| | | ||| || || |||||| | || ||| |||||||||||||||| Sbjct 1766042 TCGACATGTAGTTGTATGTCTCAATGGCGGCTTCGATGTCCTCGCCGTGGATACCGACAG 1766101 Query 139901 AGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGAT 139960 ||| ||||| | ||| ||||| ||||||||||||| ||| || || | ||||| Sbjct 1766102 CGACACGCATGATCATCTGTTGTGGCCGTTCGGCCACCTTGCCATCAATCCTGAGCAGAT 1766161 Query 139961 A--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 | | || ||| ||||||||| | || ||||| ||||||||||| Sbjct 1766162 AGGAACG--CTCGAGGGTCTTGAACCCGAAGTATTGGTAGTTGAAATC 1766207 >seq16 Length=1709166 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| ||||| || || | ||||| ||| | | Sbjct 1053778 ATGCAGATCTTCGTCAAGACACTCACCGGCAAAACCATAACTTTGGAAGTGGAATCATCA 1053837 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || ||||| ||||| || || || || ||||| || || Sbjct 1053838 GACACAATCGACAACGTCAAGTCGAAGATTCAAGATAAGGAGGGCATCCCTCCTGACCAG 1053897 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| || || || ||| |||| || ||| | || ||||| || Sbjct 1053898 CAGCGCCTCATCTTCGCTGGCAAGCAGTTGGAAGACGGCCGAACGCTCTCGGATTACAAT 1053957 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 || || ||||| ||||| | ||||||||| |||| | || || |||| Sbjct 1053958 ATCCAGAAGGAGTCGACCTTGCACTTGGTGCTGCGTCTTCGTGGTGGCG 1054006 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| || || || || || || || || || ||| | || Sbjct 1053550 ATGCAGATCTTCGTCAAGACGCTCACTGGAAAGACCATCACCCTTGAGGTTGAATCTTCC 1053609 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || ||||| || || Sbjct 1053610 GACACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAG 1053669 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||||| || || ||||| || || ||| | || || || ||| Sbjct 1053670 CAGCGCCTGATCTTTGCTGGAAAGCAGCTCGAAGACGGCCGAACTCTCTCTGACTACAAC 1053729 Query 24884 ATTCAAAAGGAATCGAC 24900 || ||||||||||| || Sbjct 1053730 ATCCAAAAGGAATCCAC 1053746 >seq18 Length=1930349 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||| ||| | || || || || || || ||||| || ||||| || || | | Sbjct 1554055 GATGCAG--CTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGAG 1554112 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 1554113 CGACACCATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCA 1554172 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859 ||| ||| ||||||||||||| || ||||| |||||| Sbjct 1554173 ACAGCGTCTGATCTTTGCCGGAAAGCAGCTTGAGGAT 1554209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897487525600