Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq20 122 1e-21 seq19 95.1 2e-13 seq11 93.3 7e-13 >seq20 Length=2175025 Score = 122 bits (134), Expect = 1e-21 Identities = 181/257 (70%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 ||||| |||||||| || |||| ||| ||||||||||||||||||||||| || || || Sbjct 1765762 TGGTCAACATAGCGGGCAGTGTTGTTGAAGACGCGGAGCATGGGCACAAGACCATTTGAT 1765821 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 |||||| ||||| | | ||| | || | || || | ||| || | ||| Sbjct 1765822 GTGCCGTTAGTGCCTCCGATGTACGAACCGGTAGCACGGATACGGTGAACGTTCAGACCG 1765881 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 ||||| || || ||||||||| | ||||| | || || || || || ||||| ||| Sbjct 1765882 ATGCCACCAGCGTTCTTGGAGATCATAGCGCAGGTCTTGAGGGTGTCATAAATGCCATCG 1765941 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 || ||| |||||||||| | || ||||| || | | || ||| || ||| || Sbjct 1765942 ATGCTGTCCTCCTTCATGTCGATGAGGAAGCAAGAGGCGAGCTGAGGGTTCGGCGTACCA 1766001 Query 2073781 GCATTGAAGAGCGTGGG 2073797 || |||||||||| || Sbjct 1766002 GCGCTGAAGAGCGTAGG 1766018 Score = 107 bits (118), Expect = 3e-17 Identities = 88/107 (82%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 |||||||||||| | || ||||| | ||| | || | || |||||||||||||||||| Sbjct 96222 GCCGCCAACTACATGGATATCAAAGCTCTCTTGGACGTCGGATGCAAGACCGTGGCCAAC 96281 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACAT 2035753 | |||||||||||||| || ||||| ||||||||||| || ||||| Sbjct 96282 ATGATCAAGGGCAAGTCTCCAGAGGAGATCCGCAAGACGTTCAACAT 96328 Score = 91.5 bits (100), Expect = 2e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 2071860 CATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTT 2071919 ||| |||| |||| |||||||| |||| || ||||| || || ||| ||||||||| Sbjct 1765608 CATGAACAAGTCGGGGATCCACAGGGCGTAGAACAGATCACGAGCGCGGACCTCCTCCTT 1765667 Query 2071920 GCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTA 2071979 |||||||||||| | |||||||| | || | || || ||||||||||||| ||| Sbjct 1765668 GCCGTGGTTCTTCCTGAGGTCGAGGAACGAGAACACATCCGCATGCCACGGCTCCACGTA 1765727 Query 2071980 GCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 | ||| || || || |||||| ||| || Sbjct 1765728 GATGGCGAAAGCTCCGGGACGCTTGTTGCCACC 1765760 >seq19 Length=1981524 Score = 95.1 bits (104), Expect = 2e-13 Identities = 75/90 (83%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||||||||| || || || ||||||||| |||| || || || ||| Sbjct 652993 GTACTTGGTGACGGCCTTGGTGCCTTCCGACACGGCGTGCTTGGCAAGCTCACCCGGCAG 653052 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCG 1485560 ||| ||||| |||| ||||||||| ||||| Sbjct 653053 GATGAGGCGGACGGAGGTCTGGATTTCGCG 653082 >seq11 Length=1047007 Score = 93.3 bits (102), Expect = 7e-13 Identities = 213/316 (67%), Gaps = 6/316 (2%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || ||||||||| |||||| ||||| |||||||| | Sbjct 556286 TGACACCAGCCTTCTGGTAGTCACCCACGCGCTTCTCGAAGAAGTTCGTCTTGCCTGATA 556345 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGC--CGTCAGGTAGTGCTTCTCGCACCC 794008 ||||||| |||||| | |||||| ||| ||| ||||| | | | || Sbjct 556346 GCGAGATGTTCTCCATAAAGTCGAACGGATTGCTAACGTT--GTAGTACCTTTGATTGCC 556403 Query 794009 GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068 ||| | | || || ||||| || ||||| ||||||||||| | |||||| | ||| Sbjct 556404 GAGTGCCAGGAGGAGACGGTCAGCCACGAACTCAATGTACTGTCTCATGAGATTCGAGTT 556463 Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128 |||||| | || || || || || | || | | ||||||| ||| ||| |||||| Sbjct 556464 CATGCCAAGCAGTGCTACAGGGAGAGCGTCCGTCAGGAACTCTTGCTCAATCGTGACGGC 556523 Query 794129 CTCGATGATGATCTGCCTGGGCACGTCGGACGACGG-CTTGTCGACGAGCATCGTGTAGA 794187 || ||||||| | | ||| | | | | ||| ||||| ||| || | | | Sbjct 556524 TTCAGTGATGATGT-CTTGGACCAATTGCTGGTCGGGCTTGTTCTTGAGGTGCGAGAACA 556582 Query 794188 GCAGGCAGGCAAAGTC 794203 ||| |||||||||||| Sbjct 556583 GCAAGCAGGCAAAGTC 556598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916244272508780