Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq16 107 1e-18 seq18 102 5e-17 seq15 98.7 6e-16 >seq16 Length=1709166 Score = 107 bits (118), Expect = 1e-18 Identities = 141/193 (73%), Gaps = 8/193 (4%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || || || | ||| ||||||||||||||| ||||| || ||| |||| |||| Sbjct 1053534 CAGCACGAGATGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCATC 1053475 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || ||||||||||| || |||||||| || |||||||| | || | ||||||||||| Sbjct 1053474 CTCAAGTTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTC 1053415 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTA 34940 | || || ||||| || | ||||| || | ||| || |||| ||| | Sbjct 1053414 CTGAATCTTGCTCTTGAC--AT--TGTCGATGGTGTCGGAAGACTCAACCTCAAGGGTGA 1053359 Query 34941 TGGTCTTTCCCGT 34953 ||||||||||||| Sbjct 1053358 TGGTCTTTCCCGT 1053346 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| || ||||| ||||| || || | || | || || || |||||||| || ||| Sbjct 1053740 TCCTTTTGGATGTTGTAGTCAGAGAGAGTTCGGCCGTCTTCGAGCTGCTTTCCAGCAAAG 1053681 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 ||||| || |||||||| | || | ||||||||||| | || || |||||| Sbjct 1053680 ATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGCTCTTGACGTTG 1053621 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | || | || || |||| ||| ||||||||||| ||||| ||||| || Sbjct 1053620 TCGATGGTGTCGGAAGATTCAACCTCAAGGGTGATGGTCTTTCCAGTGAGCGTCTTGACG 1053561 Query 34967 AAGATCTGCAT 34977 ||||||||||| Sbjct 1053560 AAGATCTGCAT 1053550 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||| ||| | ||| ||||||||| || || || ||||| || | || | || Sbjct 1053990 CAGCACCAAGTGCAAGGTCGACTCCTTCTGGATATTGTAATCCGAGAGCGTTCGGCCGTC 1053931 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 |||| ||||| || |||||||| || || |||||||| | || | |||||||| || Sbjct 1053930 TTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATC 1053871 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| | || | || | || || || | |||||||| Sbjct 1053870 TTGAATCTTCGACTTGACGTTGTCGATTGTGTCTGATGATTCCACTTCCAAAGTTATGGT 1053811 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||| ||||| || ||||||||||| Sbjct 1053810 TTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 1053778 >seq18 Length=1930349 Score = 102 bits (112), Expect = 5e-17 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 34776 GAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCT 34835 ||||| |||| ||||||| ||||| ||||| || | || |||| || || |||| Sbjct 1554255 GAATGTTGCTGACCTTCTGGATGTTGTAGTCGCTCAGAGTCCGGCCATCCTCAAGCTGCT 1554196 Query 34836 TTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTT 34895 ||||||| |||||||| || || ||||| | || | ||||||||||| | || || Sbjct 1554195 TTCCGGCAAAGATCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGC 1554136 Query 34896 GTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGA 34955 |||||| | || | || | | ||| || || | ||| || ||||| ||||||| Sbjct 1554135 TCTTGACGTTGTCGATGGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGA 1554076 Query 34956 GGGTCTTTACAAAGATCTGCATGAT 34980 ||||||| || ||| |||||| || Sbjct 1554075 GGGTCTTGACGAAG--CTGCATCAT 1554053 >seq15 Length=1704560 Score = 98.7 bits (108), Expect = 6e-16 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| ||| ||||||||| ||||| ||||| || ||| |||| | || Sbjct 828572 AGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCT 828631 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| || ||||||||||| || |||||||| | || | ||||||||||| Sbjct 828632 TCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTC 828690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692720612380