Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq16 141 2e-28 >seq16 Length=1709166 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 |||||| || ||||||| || || || ||||| ||||| ||||| || || ||| || Sbjct 1053993 ACGCAGCACCAAGTGCAAGGTCGACTCCTTCTGGATATTGTAATCCGAGAGCGTTCGGCC 1053934 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 |||||| | || || ||||| ||||| || | || || || ||||| || || ||||| Sbjct 1053933 GTCTTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTT 1053874 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 |||||||||||| | || || || || || || || | ||| |||||||||||||| Sbjct 1053873 ATCTTGAATCTTCGACTTGACGTTGTCGATTGTGTCTGATGATTCCACTTCCAAAGTTAT 1053814 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || ||||| || | ||||| || || |||||||| Sbjct 1053813 GGTTTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 1053778 Score = 132 bits (146), Expect = 9e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || ||| ||||| | |||| ||| ||||| || || || || || |||| Sbjct 1053778 TACCACCACGCAGACGGAGAACAAGATGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAG 1053719 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| ||| |||||||| || || |||||||||||||| || | || || || |||| Sbjct 1053718 AGAGAGTTCGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAG 1053659 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCT 82760 | || || ||||| || |||||| ||||| || || || || || || || || ||| Sbjct 1053658 GAATGCCCTCCTTGTCCTGAATC-TTGCTCTTGACGTTGTCGATGGTGTCGGAAGATTCA 1053600 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || | || || ||||| || || | |||||| || || |||||||| Sbjct 1053599 ACCTCAAGGGTGATGGTCTTTCCAGTGAGCGTCTTGACGAAGATCTGCAT 1053550 Score = 98.7 bits (108), Expect = 2e-15 Identities = 148/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || |||||| || | || || || || || ||||| || || || || | Sbjct 1053550 TACCACCACGCAGACGCAGCACGAGATGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGG 1053491 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | ||| || || ||||| |||||||||||||| || | || || || |||| Sbjct 1053490 ACAGGGTGCGACCATCCTCAAGTTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGAG 1053431 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCT 82760 | || || ||||| || |||||| ||||| || ||||| || || || || || || Sbjct 1053430 GAATGCCCTCCTTGTCCTGAATC-TTGCTCTTGACATTGTCGATGGTGTCGGAAGACTCA 1053372 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCA 82788 || || | || || ||||| || |||| Sbjct 1053371 ACCTCAAGGGTGATGGTCTTTCCCGTCA 1053344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826948406780