Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq11 104 6e-17 >seq11 Length=1047007 Score = 104 bits (114), Expect = 6e-17 Identities = 300/456 (66%), Gaps = 7/456 (2%) Strand=Plus/Minus Query 110674 CTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATC 110733 |||| | ||| || || |||||| | | |||||||||||||||| |||| ||| Sbjct 148852 CTTCGAATGGCCTGGTCCCAATGCTTCGTATCTTCAACGACACTGCTCGTTATGCTGATC 148793 Query 110734 AAGGTGGTAAGA---GAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATA 110790 |||| || || | | ||| ||||||| | || | || || ||||| | ||| Sbjct 148792 AAGGGGGAAACAAACGCCCTGGAGCATTTGCCGTATACTTGGAGCCCTGGCACGCGGATG 148733 Query 110791 TATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATT 110850 | |||| ||| |||| ||||| || ||||| || |||||| | | || || ||| Sbjct 148732 TGTTTGCTTTCCTAGACCTTCGCAAGAATCACGGCAAAGAAGAAAATCGTGCCCGCGATC 148673 Query 110851 TATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGT 110910 | ||| ||||| | ||||| | | | |||||||| || ||| | |||| | | Sbjct 148672 TTTTTAATGCACTCTGGATCCCTAACCTGTTCATGAAGCGCGTTGAGCAAAACGAAGATT 148613 Query 110911 GGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTG 110970 || | | ||||| || | | || || || ||||||| || ||| |||| |||| Sbjct 148612 GGACGTTGATGTGCCCGGACGAATGCCCGGGGCTGCCTGATGTTTACGGACAAGATTTTG 148553 Query 110971 AAGAC-CTTTACGAAAAATATGAAAAAG-AAGGCAAGTTTCGCAAACAAATTCCAGCTCA 111028 |||| || |||||| |||||| || | ||||| | |||| ||||| ||||| Sbjct 148552 -AGACGCTGTACGAACGATATGAGAAGGAAAGGCGTG-GACGCAGGACCATTCCCGCTCA 148495 Query 111029 AGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTA 111088 || ||| ||| || || | |||||||| ||||| ||||| || || | || Sbjct 148494 CATCCTATGGCGTGCAATTCTGGACGCCCAAGTTGAGACTGGCACTCCGTACATGCTCTA 148435 Query 111089 TAAAGATCATATTAATCGCAAATCTAATCAAATGAA 111124 || ||| ||| |||||| || |||| ||| Sbjct 148434 CAAGGATGCCTGTAACCGCAAAAGCAACCAAAAGAA 148399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812495879220