Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq11 127 3e-23 seq20 123 4e-22 seq15 98.7 1e-14 >seq11 Length=1047007 Score = 127 bits (140), Expect = 3e-23 Identities = 215/305 (70%), Gaps = 15/305 (5%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || |||||||||||||| || ||||| || |||||| |||| | Sbjct 557198 GATCTGGCAGATGTAC-AAGAAGGCCGAGGCCTCGTTCTGGACGGCAGAGGAGATCGATC 557140 Query 1455835 TCGGCGCCGACACGGTCCAC---TGG-----GTGTCGCTGAGCGACGACGAGCGCCATTT 1455886 | | || | | ||||| ||| | ||| | | ||| |||||||| || Sbjct 557139 T-GTCGAAGGATC--TCCACGACTGGAACAAGCGTCTC--AACGATGACGAGCGGTTCTT 557085 Query 1455887 CATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGG 1455946 |||| |||||||||||||| || ||||||| ||||||||||| ||| ||||| | Sbjct 557084 CATCTCCCACGTCCTCGCCTTCTT-CGCCGCCTCGGATGGCATCGTCAACGAAAACCTAG 557026 Query 1455947 CCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGA 1456006 || ||||| || || || | |||||||| || | || ||||| ||||||| Sbjct 557025 TCGAGCGCTTCTCATCCGAAGTACAGATCCCAGAGGCCCGATGCTTCTACGGCTTCCAGA 556966 Query 1456007 TCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGG 1456066 || || || |||||||| || || || |||||||| || || ||||| || || || Sbjct 556965 TCATGATGGAGAACATCCATTCGGAGACGTACTCGCTGCTCATTGACACATATATCTCGG 556906 Query 1456067 ACCCG 1456071 | ||| Sbjct 556905 AGCCG 556901 Score = 91.5 bits (100), Expect = 2e-12 Identities = 226/333 (68%), Gaps = 10/333 (3%) Strand=Plus/Minus Query 1456452 TGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAG-CCGTCGACCGAC 1456510 ||||| |||||||||||| |||| | | || ||| |||||| ||| | | | | Sbjct 556606 TGCACACTGACTTTGCCTGCTTGCTGTTCTCGCACCTCAAGAACAAGCCCGACCAGCAAT 556547 Query 1456511 GTGCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCG 1456570 | ||||| | |||||| || |||||| ||| ||| ||||||| | | || | Sbjct 556546 TGGTCCAAG-ACATCATCACTGAAGCCGTCACGATTGAGCAAGAGTTCCTGACGGACGCT 556488 Query 1456571 CTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTG 1456630 || || || || || | ||||||||| | | |||||| | |||||||||| | || | Sbjct 556487 CTCCCTGTAGCACTGCTTGGCATGAACTCGA-ATCTCATGAGACAGTACATTG-AGTTCG 556430 Query 1456631 TCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACG--GCCAACC 1456688 | || ||||| || ||| ||| |||||| | | | ||||| ||| ||| | Sbjct 556429 TGGCTGACCGTCTCCTCCTGGCACTCGGC-AATCAAAGGTACTAC--AACGTTAGCAATC 556373 Query 1456689 CGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG 1456748 ||||| | |||||| |||||||| |||||||| ||||| |||||| |||| Sbjct 556372 CGTTCGACTTTATGGAGAACATCTCGCTATCAGGCAAGACGAACTTCTTCGAGAAGCGCG 556313 Query 1456749 T-GGCGAGTACGCCAAGGCCGGCGTCACCGCCA 1456780 | || || ||| ||||| || |||| |||| Sbjct 556312 TGGGTGACTACCAGAAGGCTGGTGTCATGGCCA 556280 >seq20 Length=2175025 Score = 123 bits (136), Expect = 4e-22 Identities = 200/288 (69%), Gaps = 0/288 (0%) Strand=Plus/Minus Query 259894 CATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCG 259953 ||||||| | ||| ||||| || | || |||||||| | || || |||||| Sbjct 1766049 CATGTCGAACAAGTACTTCACGCACGCCTCCCCTACGCTCTTCAGCGCTGGTACGCCGAA 1765990 Query 259954 CCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTA 260013 ||| ||| | || ||||| || | |||||||||| || ||||| ||||| || Sbjct 1765989 CCCTCAGCTCGCCTCTTGCTTCCTCATCGACATGAAGGAGGACAGCATCGATGGCATTTA 1765930 Query 260014 TGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGC 260073 |||||| |||||| ||||| | ||||||||| || || ||||||||| | || Sbjct 1765929 TGACACCCTCAAGACCTGCGCTATGATCTCCAAGAACGCTGGTGGCATCGGTCTGAACGT 1765870 Query 260074 ACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCT 260133 ||| | || || | || | ||| | | ||||| |||||| || || || || Sbjct 1765869 TCACCGTATCCGTGCTACCGGTTCGTACATCGGAGGCACTAACGGCACATCAAATGGTCT 1765810 Query 260134 TGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCA 260181 |||||||||||| ||||| || ||| |||| || ||||| || ||||| Sbjct 1765809 TGTGCCCATGCTCCGCGTCTTCAACAACACTGCCCGCTATGTTGACCA 1765762 >seq15 Length=1704560 Score = 98.7 bits (108), Expect = 1e-14 Identities = 138/191 (72%), Gaps = 11/191 (6%) Strand=Plus/Plus Query 165444 CTGTTGGTCGTCGTCGGTCCGTGTTCGGCACACGACCCGGACGCCGTTGTCGAGTA-TGG 165502 ||| ||||| | ||||| || || ||| |||||||| | | ||| | ||||||| || Sbjct 405834 CTGCTGGTCATGGTCGGACCCTGCTCGCTCCACGACCCCGCCACCGCTATCGAGTACTGC 405893 Query 165503 TCGGCGGTTGCGCGCCCTCGTACGGGCCGA---GGTCGACGACGCCCTTTGTGTGGTCAT 165559 ||| ||| | || || |||||| | || |||| | | | || || |||| Sbjct 405894 TCG-CGGCTCAAGGCTCT------GGCCGACAAGCTCAACGAGGACTTGTGCGTCATCAT 405946 Query 165560 GCGCGCCTATGTCGAAAAGCCGCGCACGACCGTTGGATGGAAGGGCCTGGCCAGTGACCC 165619 ||||||||| ||||||||||||| || || || ||||||||||||||| || ||||| Sbjct 405947 GCGCGCCTACCTCGAAAAGCCGCGGACAACGGTGGGATGGAAGGGCCTGATCAACGACCC 406006 Query 165620 CGATCTTGATG 165630 ||| |||||| Sbjct 406007 GGATATTGATG 406017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177809270963240