Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq16 113 4e-20 seq18 100 3e-16 seq15 89.7 5e-13 >seq16 Length=1709166 Score = 113 bits (124), Expect = 4e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || ||| | ||| | ||| |||||| ||||||||||| |||| | Sbjct 1053548 CCACCACGCAGACGCAGCACGAGATGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGAC 1053489 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || || ||||| || ||||| |||| ||||||||||| | |||| Sbjct 1053488 AGGGTGCGACCATCCTCAAGTTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGA 1053429 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||||||| ||||| ||| | | | | | |||||| || || ||| Sbjct 1053428 ATGCCCTCCTTGTCCTGAATCTTGCTCTTGACATTGTCGATGGTGTCGGAAGACTCAACC 1053369 Query 35690 TCCACCGTGATCGTTTTACCCGTCA 35714 || | ||||| || || ||||||| Sbjct 1053368 TCAAGGGTGATGGTCTTTCCCGTCA 1053344 Score = 109 bits (120), Expect = 5e-19 Identities = 141/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 |||||||| |||||||| || | | ||||| |||| || |||||||| || ||||| Sbjct 1053740 TCCTTTTGGATGTTGTAGTCAGAGAGAGTTCGGCCGTCTTCGAGCTGCTTTCCAGCAAAG 1053681 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| ||||||||||| | ||||| || |||||||||| ||||| ||| | ||| Sbjct 1053680 ATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGCTCTTGA-CGTT 1053622 Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | |||||| ||||| ||||| | ||||| || || || || | || || || Sbjct 1053621 GTCGATGGTGTCGGAAGATTCAACCTCAAGGGTGATGGTCTTTCCAGTGAGCGTCTTGAC 1053562 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 1053561 GAAGATCTGCAT 1053550 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || |||||| || || || |||||| || || |||||||| | Sbjct 1054004 CCACCACGAAGACGCAGCACCAAGTGCAAGGTCGACTCCTTCTGGATATTGTAATCCGAG 1053945 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||||| |||| |||| |||||| || || || || | ||||||||||| | ||| Sbjct 1053944 AGCGTTCGGCCGTCTTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCAGGAGGG 1053885 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || |||||| || ||||| ||| | |||| | | ||||| |||||||| Sbjct 1053884 ATGCCCTCCTTATCTTGAATCTTCGACTTGA-CGTTGTCGATTGTGTCTGATGATTCCAC 1053826 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| || || ||||| || || | || || || || |||||||| Sbjct 1053825 TTCCAAAGTTATGGTTTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 1053778 >seq18 Length=1930349 Score = 100 bits (110), Expect = 3e-16 Identities = 124/167 (74%), Gaps = 2/167 (1%) Strand=Plus/Minus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| || |||||||| ||| || || || | || || |||||||| || ||||| | Sbjct 1554243 CCTTCTGGATGTTGTAGTCGCTCAGAGTCCGGCCATCCTCAAGCTGCTTTCCGGCAAAGA 1554184 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 ||| ||||| ||||| | |||| || |||||||||| |||||| ||| | |||| Sbjct 1554183 TCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGAC-GTTG 1554125 Query 35667 CC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 | | ||||||||||| |||||||| | ||||| || || ||||| Sbjct 1554124 TCGATGGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCGT 1554078 >seq15 Length=1704560 Score = 89.7 bits (98), Expect = 5e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || |||| ||||||||||| || || || Sbjct 828592 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCCAGCTGCTTGCCAGCGAA 828651 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 |||| ||||||||||| | |||| || ||||||||| Sbjct 828652 GATCAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTC 828690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793487301600