Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq20 199 5e-46 seq11 86.0 8e-12 >seq20 Length=2175025 Score = 199 bits (220), Expect = 5e-46 Identities = 618/946 (65%), Gaps = 23/946 (2%) Strand=Plus/Plus Query 111217 ATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATC 111276 || ||| || | || ||||| | || ||||| ||||| || || ||||||| | | Sbjct 1765257 ATCGACGTAGGTGGGTAGGGCCAGCGACGCCAAGTTGCACACGGCGACCTCATCCGGAGC 1765316 Query 111277 TGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTG 111336 |||||||| | ||| ||||| || | ||||| || || || | ||||| || Sbjct 1765317 AGTGTACTCGACAATCTCTGTGCAGAGATTGGAGCTGCGGATGACACCGAGGTTCTTCTG 1765376 Query 111337 GTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTG 111396 ||| ||||| ||||| |||||||||||||||||| |||| | || ||||| ||||| Sbjct 1765377 GTTGCTCTTGCGATTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCGGTCTCGGTCTG 1765436 Query 111397 TGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGT--TGGCC-CGTC 111452 | | ||| || || | ||| | | || | | || |||| || | || || | Sbjct 1765437 AGCCTCGAGGATGGCATACCACAGCTTCTGAGCACGG----ATGGTGTCACGACCGCGAC 1765492 Query 111453 CCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGAC 111512 | ||| |||||| ||||| |||| ||||| ||||| | |||| |||| Sbjct 1765493 CTTCCTTCTCGTAGCGCTCATAGAGTTCTTCGAACTCGTCACCATAAACATCGGCAAGAC 1765552 Query 111513 CTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGA 111572 | || || || || || | || | ||| || | ||| || |||||||||| Sbjct 1765553 CAGGGCACTCGTTGGGGCACATCAGCGTCCAGGTGCCGTTCTGCTCGACACGCTTCATGA 1765612 Query 111573 AAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTT 111632 | | ||| || |||||||||| | || ||||| | | || |||| || | || | Sbjct 1765613 ACAAGTCGGGGATCCACAGGGCGTAGAACAGATCACGAGCGCGGACCTCCTCCTTGCCGT 1765672 Query 111633 GGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTG 111692 |||| | | || |||||| | | |||||| ||||| ||||| | |||| | Sbjct 1765673 GGTTCTTCCTGAGGTCGAGGAACGAGAACACATCCGCATGCCACGGCTCCACGTAGATGG 1765732 Query 111693 CGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAA 111746 ||| || ||| ||||| ||| |||| | |||||||| || ||| ||| | Sbjct 1765733 CGAAAGCTCC---GGGACGCTTGTTGCCACCTTGGTCAACATAGCGGGCAGTGTTGTTGA 1765789 Query 111747 ATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGA 111804 | ||||| ||||| || | || ||||| |||| || || || || |||| ||| || Sbjct 1765790 AGACGCGGAGCATGGGCACAAGACCATTTGATGTGCCGTTAGTGCCTCCGATGTAC--GA 1765847 Query 111805 TTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTG 111864 | || | | | || | || || || || || ||||| ||| ||||| Sbjct 1765848 ACCGGTAGCACGGATACGGTGAACGTTCAGACCGATGCCACCAGCGTTCTTGGAGATCAT 1765907 Query 111865 CGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAG 111924 || || | | || || |||| || || | ||| ||||||||| || |||| || Sbjct 1765908 AGCGCAGGTCTTGAGGGTGTCATAAATGCCATCGATGCTGTCCTCCTTCATGTCGATGAG 1765967 Query 111925 GAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTG 111984 ||||||| || | ||| || | || |||||||| ||||||| || || | ||||| Sbjct 1765968 GAAGCAAGAGGCGAGCTGAGGGTTCGGCGTACCAGCGCTGAAGAGCGTAGGGGAGGCGTG 1766027 Query 111985 AATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCC 112043 |||| ||| | | ||||| | || ||||||||| | | | | || ||||| || | Sbjct 1766028 CGTGAA-GTACTTGTTCGACATGTAGTTGTATGTCTCAATGGCGGCTTCGATGTCCTCGC 1766086 Query 112044 CGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCAT 112103 ||||||| |||| ||||| ||||||| ||| | ||||| ||| | |||||| Sbjct 1766087 CGTGGATACCGACAGCGACACGCATGATCATCTGTTGTGGCCGTTCGGCCACCTTGCCAT 1766146 Query 112104 CGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149 | | || | |||||| ||| ||||| |||| || ||||| Sbjct 1766147 CAATCCTGAGCAGATAGGAACGCTCGAGGGTCTTGAACCCGAAGTA 1766192 >seq11 Length=1047007 Score = 86.0 bits (94), Expect = 8e-12 Identities = 123/171 (72%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 111221 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 111280 || ||| ||| || || | ||||||| ||| ||||| || | || ||| | | ||| Sbjct 148291 ACGTACGATGGTAGCGCCAGCGATGCCAGATTACAAACGGCGATTTCGTCCGGAGCAGTG 148350 Query 111281 TACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAA-TTCTTTTGGTT 111339 ||||| | || || || || | || || |||| || | | |||| ||||||||||| Sbjct 148351 TACTCGATTATCTCAGTGCAGAGATTCGAGCTCTGGAT-GACGCCAAGGTTCTTTTGGTT 148409 Query 111340 ACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTC 111390 || || ||| || |||||||||||||||||||| || || || ||||| Sbjct 148410 GCTTTTGCGGTTACAGGCATCCTTGTAGAGCATGTACGGAGTGCCAGTCTC 148460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031842992000