Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq20 244 1e-59 seq11 104 3e-17 >seq20 Length=2175025 Score = 244 bits (270), Expect = 1e-59 Identities = 910/1399 (65%), Gaps = 43/1399 (3%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 ||||| | ||| ||||||| || || ||||||| || || || ||||| || | | | Sbjct 1766126 CCACAACAGATGATCATGCGTGTCGCTGTCGGTATCCACGGCGAGGACATCGAAGCCGCC 1766067 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||||||| || | ||||| | | ||| |||| ||||| | || || ||||| Sbjct 1766066 ATTGAGACATACAACTACATGTCGAACAAGTAC-TTCACGCACGCCTCCCCTACGCTCTT 1766008 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 || |||||||| || | || || | || ||||||||| |||| || |||||||| Sbjct 1766007 CAGCGCTGGTACGCCGAACCCTCAGCTCGCCTCTTGCTTCCTCATCGACATGAAGGAGGA 1765948 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 | ||| | || || |||| || || | | || || ||||| ||| ||||| Sbjct 1765947 CAGCATCGATGGCATTTATGACACCCTCAAGACCTGCGCTATGATCTCCAAGAACGCTGG 1765888 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACA 104518 || || || || || | || | | | || | || ||| |||| || || Sbjct 1765887 TGGCATCGGTCTGAACGTTCACCGTATCCGTGCTACCGGTTC--GTACATCGGAGGCACT 1765830 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 || || |||| ||||| || | || ||||| ||||| || ||| ||| || |||||| Sbjct 1765829 AACGGCACATCAAATGGTCTTGTGCCCATGCTCCGCGTCTTCAACAACACTGCCCGCTAT 1765770 Query 104579 GTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 104632 || | |||| ||| ||||| ||| || |||| |||| | ||||| ||| Sbjct 1765769 GTTGACCAAGGTGGCAACAAGCGTCCC---GGAGCTTTCGCCATCTACGTGGAGCCGTGG 1765713 Query 104633 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG--CGC 104690 || |||||| | | |||||| || | | ||||| || | ||||||| ||| Sbjct 1765712 CATGCGGATGTGTTCTCGTTCCTCGACCTCAGGAAGAACCACGGCAAGGAGGAGGTCCGC 1765653 Query 104691 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750 | | || ||||| |||| ||| || ||||| || || | ||||||||| | || ||| Sbjct 1765652 GCT--CGTGATCTGTTCTACGCCCTGTGGATCCCCGACTTGTTCATGAAGCGTGTCGAGC 1765595 Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGG 104810 ||| |||| ||| | || | || || || || |||||||| |||||| | Sbjct 1765594 AGAACGGCACCTGGACGCTGATGTGCCCCAACGAGTGCCCTGGTCTTGCCGATGTTTATG 1765535 Query 104811 GTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGG 104870 |||| ||||| |||| || || |||||| | |||||||| | || || Sbjct 1765534 GTGACGAGTTCGAAGAACTCTATGAGCGCTACGAGAAGGAAGGTCGCGGTCGTGACACCA 1765475 Query 104871 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929 | | ||| | || | ||||| | || || ||| || |||| |||||||| |||| || Sbjct 1765474 TCCGTGCT-CAGAAGCTGTGGTATGCCATCCTCGAGGCTCAGACCGAGACCGGTAACCCC 1765416 Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989 | |||||| ||||| || || || || | ||||| || || ||||| | ||||| ||| Sbjct 1765415 TTCATGCTCTACAAGGATGCTTGCAATCGCAAGAGCAACCAGAAGAACCTCGGTGTCATC 1765356 Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049 || ||||||||||| ||||| || | || | || | |||||| || ||| Sbjct 1765355 CGCAGCTCCAATCTCTGCACAGAGATTGTCGAGTACACTGCTCCGGATGAGGTCGCCGTG 1765296 Query 105050 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGAT---CCAGAGACAAAGACATTT 105106 || ||| | || || | || || |||| || || ||| | ||| |||| ||| Sbjct 1765295 TGCAACTTGGCGTCGCTGGCCCTACCCACCTACGTCGATATGACCGAG---GAGACCTTT 1765239 Query 105107 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATT 105166 || | | || |||||||| || || | |||| ||| ||| | |||| | || Sbjct 1765238 GACTTCAAGAAGCTCCACGAGGTCACCCAGGTTGTCGTCAAGAACTTGAACAAGATCATC 1765179 Query 105167 GATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 105223 | || |||||||| |||| || || || || | | || || || Sbjct 1765178 AACCTGAACCACTACCCCGTGCCTGAG---GCAAAGAAGTCCAACTTCCGTCATCGCCCC 1765122 Query 105224 ATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTT-G 105281 || ||||| ||||| | ||||||||||||| ||| | || || || || || ||| | Sbjct 1765121 ATCGGTCTGGGTGTCAATGGTCTCGCGGATGCCTTCTTGGCTCTG-CG-CATGCCTTTCG 1765064 Query 105282 ATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTC 105341 | ||| ||| || | |||| | || || |||||||| || ||||| || | Sbjct 1765063 ACTCCCCCGAGGCTCGCCAGCTCAACATCCAGATCTTCGAGACCATCTACCACGCTGCAC 1765004 Query 105342 TTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTC 105401 || ||| | || | ||| || || || |||||||| | |||||||||| Sbjct 1765003 TTACCGCGTCGTGCGACCTCGCAAAGCAGCTCGGGCCTTATGAAACATACGAGGGTTCTC 1764944 Query 105402 CAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTA 105459 | | ||| |||||| | ||| || | || ||||||| || | || | | || | Sbjct 1764943 CCGTTTC-CAAGGGCGAGCTGCAGTACGACATGTGGG-GTGTCACTCCCACCGATCTGTG 1764886 Query 105460 CGACTGGGA-AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCA 105518 || ||| | |||| | ||||| ||| || | ||| | || ||| ||| ||| Sbjct 1764885 GGATTGGCAGAGCT-TGAAGGACAAGATCGCCCAGCATGGTGTCCGCAACTCTCTTCTCG 1764827 Query 105519 TGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 105578 | || || ||||| || || || ||| | || ||| |||| ||||| ||||| || | Sbjct 1764826 TTGCCCCTATGCCGACTGCTTCTACCTCGCAGATCATGGGATTCAATGAGTGCTTCGAGC 1764767 Query 105579 CCTACACGACGAACATCTA 105597 | ||||| | |||||||| Sbjct 1764766 CTTACACTTCTAACATCTA 1764748 >seq11 Length=1047007 Score = 104 bits (114), Expect = 3e-17 Identities = 102/129 (79%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGG 94886 || ||||||||||||||| || ||||| ||| || || | |||||||||||||| || Sbjct 556718 GTAGAGGGTATCTTCTTCAGCGGCTCCTT-TGCAGCAATCTTCTGGCTCAAGAAGCGTGG 556660 Query 94887 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCA 94946 |||||| | |||||| |||||||||||||| ||||| ||||||||||| | ||| Sbjct 556659 CCTCATGGCTGGTCTCACTTTCTCCAACGAGCTCATCTCGCGTGACGAGGGCATGCACAC 556600 Query 94947 AGAGTTTGC 94955 || ||||| Sbjct 556599 TGACTTTGC 556591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260654184800