Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq20 232 7e-56 seq11 96.9 4e-15 >seq20 Length=2175025 Score = 232 bits (256), Expect = 7e-56 Identities = 519/768 (68%), Gaps = 20/768 (3%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTAC-ACGCGTGTCCGTGAGACGTAC 53251 ||||||| ||||| | ||||||||||| || ||| | | || | | |||||| ||| Sbjct 1766113 TCATGCGTGTCGCTGTCGGTATCCACGGCGAGGACATCGAAGCC-GCCATTGAGACATAC 1766055 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 ||| ||| | |||||||| ||||||||| | || || || |||| |||||||||| Sbjct 1766054 AACTACATGTCGAACAAGTACTTCACGCACGCCTCCCCTACGCTCTTCAGCGCTGGTACG 1765995 Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371 |||||||| | | |||||||| | | |||||||| ||| ||||| ||| Sbjct 1765994 CCGAACCCTCAGCTCGCCTCTTGCTTCCTCATCGACATGAAGGAGGACAGCATCGATGGC 1765935 Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431 || || || || |||||| || || ||||||||| | ||||| |||||| | Sbjct 1765934 ATTTATGACACCCTCAAGACCTGCGCTATGATCTCCAAGAACGCTGGTGGCATCGGTCTG 1765875 Query 53432 CACTGCTCGAACGT--CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCG 53489 || | || | ||| |||||| | ||| | ||| || || |||||| | Sbjct 1765874 AAC-GTTC-ACCGTATCCGTGCTACCGGTTCGTACATCGGAGGCACTAACGGCACATCAA 1765817 Query 53490 ATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549 |||| | ||||| ||||||||||||||||||||||| ||||| || || |||| |||| Sbjct 1765816 ATGGTCTTGTGCCCATGCTCCGCGTCTTCAACAACACTGCCCGCTATGTTGACCAAGGTG 1765757 Query 53550 GTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGG 53609 | ||||| || | |||||||||||| | ||||||||||| || || | | Sbjct 1765756 GCAACAAGCGTCCCGGAGCTTTCGCCATCTACGTGGAGCCGTGGCATGCGGATGTGTTCT 1765697 Query 53610 AGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-T 53668 ||| ||||| || | ||| || || | || ||| | ||| ||||| ||||| | Sbjct 1765696 CGTTCCTCGACCTCAGGAAGAACCACGGCAAGGAGGAGGTCCGCGCTCGTGATCTGTTCT 1765637 Query 53669 ACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC 53728 || || |||||||| || ||| | |||||| | || ||| || ||| ||| Sbjct 1765636 AC-GCCCTGTGGATCCCCGACTTGTTCATGAAGCGTGTCGAGCAGAACGGCACCTGGACG 1765578 Query 53729 CTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAG 53788 ||||||||||| ||||||||||| || || | ||| || ||||| ||||| | || Sbjct 1765577 CTGATGTGCCCCAACGAGTGCCCTGGTCTTGCCGATGTTTATGGTGACGAGTTCGAAGAA 1765518 Query 53789 ATGTAT---CG-GAC--GTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGT 53842 | ||| || || | | | || || || || ||| | || || | Sbjct 1765517 CTCTATGAGCGCTACGAGAAGGAAGGTCGCGGTCGTGACACCA------TCCGTGCTCAG 1765464 Query 53843 GAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTAC 53902 || | ||| |||| |||||| || ||| ||||| || | || | |||| |||| Sbjct 1765463 AAGCTGTGGTATGCCATCCTCGAGGCTCAGACCGAGACCGGTAACCCCTTCATGCTCTAC 1765404 Query 53903 AAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATC 53950 |||||| | ||| |||||||||||||||||| |||| |||||| Sbjct 1765403 AAGGATGCTTGCAATCGCAAGAGCAACCAGAAGAACCTCGGTGTCATC 1765356 Score = 91.5 bits (100), Expect = 2e-13 Identities = 296/452 (65%), Gaps = 17/452 (4%) Strand=Plus/Minus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 |||||||| || ||||| || || ||||| || || || || | ||||||||||| | Sbjct 1764842 CGCAACTCTCTTCTCGTTGCCCCTATGCCGACTGCTTCTACCTCGCAGATCATGGGATTC 1764783 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 || ||| |||||||| ||||| | ||||||||| |||||| | | ||||| ||| Sbjct 1764782 AATGAGTGCTTCGAGCCTTACACTTCTAACATCTACTCGCGCCGTGTCTTGGCAGGCGAG 1764723 Query 55604 TTTGTCATGATCAACAAGCACCTCGTCAAGGACCT-GCAGAAGATCAACAAGTGGAACCC 55662 || || ||||| | ||||||| || | || | | |||| | Sbjct 1764722 TTCCAAGTGGTCAACCCTTGGTTGCTCAAGGATCTTGTCGACCGTGGCCT-GTGGTCCGA 1764664 Query 55663 GCAGATCAAGA--CGGATATTGTGCGGAACGGGGGGTCCGTCCAG---AATCTGGAGATT 55717 | || |||| || || | || || | || ||| ||||| | || | || Sbjct 1764663 CAACATGAAGAACCGCATCATCGCCG--ACAGTGGATCCATCCAGCGCATTCCTAACATC 1764606 Query 55718 CCTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGA-AGAGTCTGAT 55776 || ||||||| | ||| ||| || |||||||| ||| || | | ||| Sbjct 1764605 CCCGATGACCTCAAGGCATTGTACAAGACTGTTTGGGAGAT----CAGCCAGCGCCAGAT 1764550 Query 55777 TG---ACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTT 55833 | | ||| ||| || |||||||| | |||||| || || ||||| || |||||| Sbjct 1764549 CGTGCAGATGGCTGCCGACCGTGGTGCTTTCATCGATCAATCGCAGTCGCTCAACATCCA 1764490 Query 55834 CATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGG 55893 |||| || | || | ||| |||| | | |||||||||||| ||| |||||| || Sbjct 1764489 CATGAAGGAGCCAACCATGGGCAAGATCACGTCGATGCACTTTGCCGGATGGAAGCTTGG 1764430 Query 55894 ACTCAAGACGGGTATGTACTATCTGCGGACCC 55925 ||||| || || |||||||| || || |||| Sbjct 1764429 TCTCAAAACTGGCATGTACTACCTCCGCACCC 1764398 >seq11 Length=1047007 Score = 96.9 bits (106), Expect = 4e-15 Identities = 170/247 (69%), Gaps = 3/247 (1%) Strand=Plus/Plus Query 75022 TGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGT 75081 ||||||| | || ||||||||||||||||| || ||| | | |||| | ||| Sbjct 556918 TGTCAATGAGCAGCGAGTACGTCTCCGAATGGATGTTCTCCATCATGATCTGGAAGCCGT 556977 Query 75082 AGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCA 75141 |||| | || ||||||| |||||||| || ||| || | | | | || || Sbjct 556978 AGAAGCATCGGGCCTCTGGGATCTGTACTTCGGATGAGAAGCGCTCGACTAGGTTTTCGT 557037 Query 75142 TGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCAT 75201 |||||||||| |||||||||||||| || || || || ||| ||| ||||| | Sbjct 557038 TGACGATGCCATCCGAGGCGGCGAAGAAGGCGAGGACGTGGGAGATGAAGAACCGCTCGT 557097 Query 75202 CGTCAGTGA---GTTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCG 75258 | || ||| | |||| ||| || | || ||| || || ||| |||||||| ||| Sbjct 557098 CATCGTTGAGACGCTTGTTCCAGTCGTGGAGATCCTTCGACAGATCGATCTCCTCTGCCG 557157 Query 75259 TCCAGAA 75265 ||||||| Sbjct 557158 TCCAGAA 557164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215863196000