Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq20 233 2e-56 seq16 176 5e-39 seq18 125 8e-24 seq15 93.3 5e-14 >seq20 Length=2175025 Score = 233 bits (258), Expect = 2e-56 Identities = 802/1236 (65%), Gaps = 57/1236 (5%) Strand=Plus/Plus Query 80538 ACCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTA 80597 |||||||||||||| ||||| ||||| || | ||||| ||| || | || || || Sbjct 1764906 ACCCCACATGTCGTACTGCAGCTCGCCCTTGGAAACGGGAGAACCCTCGTATGTTTCATA 1764965 Query 80598 CGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTC 80657 || || | ||| || || || |||||| | |||| || ||||| || ||| ||| Sbjct 1764966 AGGCCCGAGCTGCTTTGCGAGGTCGCACGACGCGGTAAGTGCAGCGTGGTAGATGGTCTC 1765025 Query 80658 AAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCAT 80717 |||| |||| | ||| |||| ||| |||||| | || || || || Sbjct 1765026 GAAGATCTGGATGTTGAGCTGGCGAGCCTCGGGGGAGTCGAAAGGCATGCGCAGAGCCAA 1765085 Query 80718 GAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG 80777 ||| | || || || || | || || | |||| ||||| || || ||| || Sbjct 1765086 GAAGGCATCCGCGAGACCATTGACACCCAGACCGATGGGGCGATGACGGAAGTTGGACTT 1765145 Query 80778 CTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTA-A 80836 || ||||| || | ||||| ||| | ||||| ||||| ||| | || | Sbjct 1765146 CTTTGCCTCAGGCACGGGGTAGTGGTTCAGGTTGATGATCTTGTTCAAGTT-CTTGACGA 1765204 Query 80837 CAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGT-TCCCCT------TC-AC 80888 ||||| | || || || || || |||| ||||| || ||| ||| | || || Sbjct 1765205 CAACCTGGGTGACCTCGTGGAGCTTCTTGAAGTCAAA--GGTCTCCTCGGTCATATCGAC 1765262 Query 80889 AAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAA 80948 | | || ||| ||| ||||||| ||||||||||| ||||| || | | | || | Sbjct 1765263 GTAGGTGGGTAGGGCCAGCGACGCCAAGTTGCACACGGCGACCTCATCCGGAGCAGTGTA 1765322 Query 80949 CTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGA 81008 |||||| || || ||||| | ||| || || ||| ||||| |||||||| Sbjct 1765323 CTCGACAATCTCTGTGCAGAGATTGGAGCTGCGGATGACACCGAGGTTCTTCTGGTTGCT 1765382 Query 81009 CTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTT 81068 |||| |||||||| ||||||||| |||| | ||| ||||||||||| ||| | || Sbjct 1765383 CTTGCGATTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCGGTCTCGGTCTGAGCCTC 1765442 Query 81069 GAGGATGGCGTCCCAAATCTC----GCGCGCCTTG----ACCACCTTGCGGAATTTGCCT 81120 ||||||||| | ||| | || || || | | || ||| ||| || ||| Sbjct 1765443 GAGGATGGCATACCACAGCTTCTGAGCACGGATGGTGTCACGACC--GCGACCTT--CCT 1765498 Query 81121 TCGGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCT 81180 || | || | || ||| ||||||| | |||| | || || | || | Sbjct 1765499 TCT----CGTAGCGCTCATAGAGTTCTTCGAACTCGTCACCATAAACATCGGCAAGACCA 1765554 Query 81181 GGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTT---CTCTACAGCCTTCATG 81237 ||||||||||| ||||||||||| ||| |||| |||| ||| ||| ||||||| Sbjct 1765555 GGGCACTCGTTGGGGCACATCAGCGTCCA---GGTGCCGTTCTGCTCGACACGCTTCATG 1765611 Query 81238 AAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCG--CCTCCTCATCAC 81295 || ||| |||||||| |||||| |||||| || || |||||| ||||||| | | Sbjct 1765612 AACAAGTCGGGGATCCACAGGGCGTAGAACAGATCACG--AGCGCGGACCTCCTCCTTGC 1765669 Query 81296 CCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACA 81355 | ||||| | | ||||| || | | ||||||||||| ||||||| || | Sbjct 1765670 CGTGGTTCTTCCTGAGGTCGAGGAACGAGAACACATCCGCATGCCACGGCTCCACGTAGA 1765729 Query 81356 CGGCGATCGACCCCTTGCGACG------GCCACCCTGGTTGACGTAACGGGCAGTCGCGT 81409 ||||| | || | |||| |||||| |||| || || |||||||| || Sbjct 1765730 TGGCGAAAGCTCC---GGGACGCTTGTTGCCACCTTGGTCAACATAGCGGGCAGTGTTGT 1765786 Query 81410 TAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCG 81469 | || || || | ||| || | | ||||| ||| ||||| || || |||| || Sbjct 1765787 TGAAGACGCGGAGCATGGGCACAAGACCATTTGATGTGCCGTTAGTGCCTCCGATGTACG 1765846 Query 81470 ACCCCTTGGCGCGCACCTTGCTGATTGAA-----AGACCGATGCCACCTGACCACTTTGA 81524 | || | || || | | | | |||| |||||||||||||| | ||| || Sbjct 1765847 AACCGGTAGCACGGA---TACGG--TGAACGTTCAGACCGATGCCACCAGCGTTCTTGGA 1765901 Query 81525 AATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTC 81584 ||| ||| || || | ||| |||||||| || |||||||| || | |||||||| Sbjct 1765902 GATCATAGCGCAGGTCTTGAGGGTGTCATAAATGCCATCGATGCTGTCCTCCTTCATGTC 1765961 Query 81585 AAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGT 81644 | | ||| || | | ||||||| | | || || |||| || || |||| Sbjct 1765962 GATGAGGAAGCAAGAGGCGAGCTGAGGGTTCGGCGTACCAGCGCTGAAGAGCGTAGGGGA 1766021 Query 81645 CGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATC 81704 ||||| |||| || ||| ||||| || || || || || || | || || Sbjct 1766022 GGCGTGCGTGAAGTACTTGTTCGACATGTAGTTGTATGTCTCAATGGCGGCTTCGATGTC 1766081 Query 81705 GTCACCGTGAATACCGATAGCTACACGCATAAACAT 81740 || ||||| ||||||| ||| |||||||| | ||| Sbjct 1766082 CTCGCCGTGGATACCGACAGCGACACGCATGATCAT 1766117 Score = 86.0 bits (94), Expect = 7e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 80031 TGCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTG 80090 |||| | || || || ||||||||||| || ||||| || |||||| ||| | ||| Sbjct 1764393 TGCCTGGGTGCGGAGGTAGTACATGCCAGTTTTGAGACCAAGCTTCCATCCGGCAAAGTG 1764452 Query 80091 CATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTG 80150 ||| || ||| ||| | | || || | || |||| |||||| || ||||| || || Sbjct 1764453 CATCGACGTGATCTTGCCCATGGTTGGCTCCTTCATGTGGATGTTGAGCGACTGCGATTG 1764512 Query 80151 ACAGATGAAAGCCCCACGATCTGCCGCCAT 80180 | ||||||||| ||||| || || ||||| Sbjct 1764513 ATCGATGAAAGCACCACGGTCGGCAGCCAT 1764542 >seq16 Length=1709166 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||||||||| || || ||||| || || ||||||||||| || Sbjct 1053550 ATGCAGATCTTCGTCAAGACGCTCACTGGAAAGACCATCACCCTTGAGGTTGAATCTTCC 1053609 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| || ||||||||||||||||| |||||||| |||||| Sbjct 1053610 GACACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAG 1053669 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || |||||||| ||||| ||||| || | || || || | ||||| || Sbjct 1053670 CAGCGCCTGATCTTTGCTGGAAAGCAGCTCGAAGACGGCCGAACTCTCTCTGACTACAAC 1053729 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||||||||| | ||||| || | ||||| || ||||| Sbjct 1053730 ATCCAAAAGGAATCCACTTTGCATCTTGTTCTCCGTCTGCGTGGTGG 1053776 Score = 168 bits (186), Expect = 8e-37 Identities = 159/203 (78%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || || ||||| || || |||||||||||||| || | ||| | ||| | ||| Sbjct 1053346 ACGGGAAAGACCATCACCCTTGAGGTTGAGTCTTCCGACACCATCGACAATGTCAAGAGC 1053405 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || ||||||||||||||||| |||||||| |||||||||||||| || |||||||| ||| Sbjct 1053406 AAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTGATCTTTGCTGGAAAG 1053465 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||||| ||||||| ||| ||||| | ||||| || | || ||||| ||||| || ||| Sbjct 1053466 CAACTTGAGGATGGTCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCCACGCTCCAT 1053525 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || || ||||||| || ||||| Sbjct 1053526 CTCGTGCTGCGTCTGCGTGGTGG 1053548 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || |||||||| || || ||| | || || || ||| Sbjct 1053778 ATGCAGATCTTCGTCAAGACACTCACCGGCAAAACCATAACTTTGGAAGTGGAATCATCA 1053837 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | || ||||| || |||||||| || ||||| |||||| Sbjct 1053838 GACACAATCGACAACGTCAAGTCGAAGATTCAAGATAAGGAGGGCATCCCTCCTGACCAG 1053897 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || ||||| ||||| | || || | || || || | || || ||| Sbjct 1053898 CAGCGCCTCATCTTCGCTGGCAAGCAGTTGGAAGACGGCCGAACGCTCTCGGATTACAAT 1053957 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || | || | || |||||||||| ||||| Sbjct 1053958 ATCCAGAAGGAGTCGACCTTGCACTTGGTGCTGCGTCTTCGTGGTGG 1054004 >seq18 Length=1930349 Score = 125 bits (138), Expect = 8e-24 Identities = 139/183 (76%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| || || ||||||||||| || || ||||| ||||| | || | ||| Sbjct 1554062 CTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGAGCGACACCAT 1554121 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | || | ||| || || |||||||||||||| ||||| || ||||| |||||||| Sbjct 1554122 CGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGTCT 1554181 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592 || ||||| || ||||| || ||||||| || || || ||| ||||| || |||| | Sbjct 1554182 GATCTTTGCCGGAAAGCAGCTTGAGGATGGCCGGACTCTGAGC-GACTACAACATCCAGA 1554240 Query 27593 AGG 27595 ||| Sbjct 1554241 AGG 1554243 >seq15 Length=1704560 Score = 93.3 bits (102), Expect = 5e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||| ||||| || ||||||||||| || || || ||||| ||||| || || Sbjct 828690 GACAAGGAGGGCATTCCCCCCGACCAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAA 828631 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | || ||||| | ||||| || |||| ||||| || || ||||| || || | Sbjct 828630 GACGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTGCTC 828571 Query 27619 CGTCTTCGCGGTGG 27632 ||||| || || || Sbjct 828570 CGTCTCCGTGGCGG 828557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310257422400