Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq16 140 3e-28 >seq16 Length=1709166 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || |||||||| | || ||| | ||||||||| | || Sbjct 1053778 ATGCAGATCTTCGTCAAGACACTCACCGGCAAAACCATAACTTTGGAAGTGGAATCATCA 1053837 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || |||||||| || || ||||| || || || || Sbjct 1053838 GACACAATCGACAACGTCAAGTCGAAGATTCAAGATAAGGAGGGCATCCCTCCTGACCAG 1053897 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166 ||||| | || | ||| ||||| || ||||||||| | ||| || | || |||||||| Sbjct 1053898 CAGCGCCTCATCTTCGCTGGCAAGCAGTTGGAAGACGGC-CGAACGCTCTCGGATTACAA 1053956 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 || || |||||||||||||| || ||||| ||||| | || |||||| Sbjct 1053957 TATCCAGAAGGAGTCGACCTTGCACTTGGTGCTGCGTCTTCGTGGTGGC 1054005 Score = 100 bits (110), Expect = 2e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069 |||| || ||| | || || ||||| || || | |||||| | || || | ||||| Sbjct 1053344 TGACGGGAAAGACCATCACCCTTGAGGTTGAGTCTTCCGACACCATCGACAATGTCAAGA 1053403 Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129 || ||||| ||||| || ||||| || || || || |||||| | || | || || | Sbjct 1053404 GCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTGATCTTTGCTGGAA 1053463 Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189 | ||| | || || || ||| | ||||| ||||||||||| |||||||| || | | Sbjct 1053464 AGCAACTTGAGGATGGTCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCCACGCTCC 1053523 Query 27190 ATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || | || ||||| |||| ||||| || Sbjct 1053524 ATCTCGTGCTGCGTCTGCGTGGTGGTAT 1053551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918291270400