Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq18 87.8 2e-12 >seq18 Length=1930349 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/201 (71%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 39089 TGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCG 39148 |||| | || || || || || ||| || || || | || |||||||| || || | Sbjct 1554249 TGCTGACCTTCTGGATGTTGTAGTCGCTCAGAGTCCGGCCATCCTCAAGCTGCTTTCCGG 1554190 Query 39149 CAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGA 39208 |||| || |||||||| ||||| | ||| | || ||| |||||| ||| || |||| Sbjct 1554189 CAAAGATCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGA 1554130 Query 39209 GCGTCGCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTT 39267 ||| | | | || |||||||||||||| || | |||||| | || ||||| || || Sbjct 1554129 -CGTTGTCGATGGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTC 1554071 Query 39268 TTAACAAAGATTTGCATCTTT 39288 || || ||| |||||| || Sbjct 1554070 TTGACGAAG--CTGCATCATT 1554052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429545495298260