Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq16 181 2e-40 seq18 143 6e-29 >seq16 Length=1709166 Score = 181 bits (200), Expect = 2e-40 Identities = 179/229 (78%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || || ||||| || ||| ||| ||||||||||||||||||| Sbjct 1053777 ACCACCACGCAGACGGAGAACAAGATGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGA 1053718 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| || || || || || || |||||||||| || || |||||| || Sbjct 1053717 GAGAGTTCGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGG 1053658 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| ||||||||||| || ||| ||||| || ||| | ||||| ||||| |||| ||| | Sbjct 1053657 AATGCCCTCCTTGTCCTGAATC-TTGCTCTTGACGTTGTCGATGGTGTCGGAAGATTCAA 1053599 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || || ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 1053598 CCTCAAGGGTGATGGTCTTTCCAGTGAGCGTCTTGACGAAGATCTGCAT 1053550 Score = 159 bits (176), Expect = 7e-34 Identities = 161/207 (78%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || || ||||| | |||| || || || ||||||||||| | Sbjct 1053549 ACCACCACGCAGACGCAGCACGAGATGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGA 1053490 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| |||||||| ||||| || || |||||||||| ||| || |||||| || Sbjct 1053489 CAGGGTGCGACCATCCTCAAGTTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGAGG 1053430 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| ||||||||||| || ||| ||||| || || | ||||| ||||| |||| || | Sbjct 1053429 AATGCCCTCCTTGTCCTGAATC-TTGCTCTTGACATTGTCGATGGTGTCGGAAGACTCAA 1053371 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCA 283077 | || || ||||| ||||| ||||||| Sbjct 1053370 CCTCAAGGGTGATGGTCTTTCCCGTCA 1053344 >seq18 Length=1930349 Score = 143 bits (158), Expect = 6e-29 Identities = 146/188 (78%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 282904 TGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGG 282963 |||| | || |||||||||||||| || || ||||||||||| || || || |||| Sbjct 1554249 TGCTGACCTTCTGGATGTTGTAGTCGCTCAGAGTCCGGCCATCCTCAAGCTGCTTTCCGG 1554190 Query 282964 CAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT-TTT 283022 ||||||||| ||| ||||||||| ||||| ||||||||||| |||||| ||||| || Sbjct 1554189 CAAAGATCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATC-TTGCTCTTG 1554131 Query 283023 ACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTC 283082 ||| | ||||| ||||| | || || ||||| ||||| ||||| ||||| | ||| Sbjct 1554130 ACGTTGTCGATGGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTC 1554071 Query 283083 TTAACGAA 283090 || ||||| Sbjct 1554070 TTGACGAA 1554063 Score = 87.8 bits (96), Expect = 4e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 315651 GTGACTAATCACCACCACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAG 315710 |||| |||| | | ||| ||||||||||| | |||||| ||| | || |||||| || Sbjct 1364701 GTGAGTAATGATGATCACACCACCTCCGAATTCCTTAAGGCCCTTGGACAGGGCACCCAG 1364642 Query 315711 ACTCTCGCGGTCCACAAAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCA 315770 | || | ||||| ||||||||||||||| || | || || | ||| ||| ||||||| Sbjct 1364641 AGAGTCTCTGTCCAAAAAGTTGGTCGGCTCGTCCAACACAATCAAGTGAGGTCGTTGCCA 1364582 Query 315771 TAGAGC-GGCGCCGATAACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAG 315829 | | || || | | |||| || | || ||||| || || ||||| ||||| | Sbjct 1364581 T-GTGCAAGCCGCAAGGACGACTTTGACACGCTGGCCACCGGAGAGACCACGCATGCGGG 1364523 Query 315830 AATGAGTGGTAAATTCTGGGTCAAGGCCAA 315859 | |||| | | ||| | ||| || |||| Sbjct 1364522 AGTGAGAGACGAGTTCGGCGTCTAGACCAA 1364493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738931773080