Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq16 176 1e-38 seq18 131 4e-25 >seq16 Length=1709166 Score = 176 bits (194), Expect = 1e-38 Identities = 163/207 (79%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| ||||| || |||||||| ||||| ||| || ||| Sbjct 1053553 CAGATCTTCGTCAAGACGCTCACTGGAAAGACCATCACCCTTGAGGTTGAATCTTCCGAC 1053612 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||||||||| || || || ||||| |||||||| Sbjct 1053613 ACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAG 1053672 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || ||||| ||||||||||| || | ||||| | || || ||| || Sbjct 1053673 CGCCTGATCTTTGCTGGAAAGCAGCTCGAAGACGGCCGAACTCTCTCTGACTACAACATC 1053732 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 ||||| ||||| || ||||||||||| Sbjct 1053733 CAAAAGGAATCCACTTTGCATCTTGTT 1053759 Score = 122 bits (134), Expect = 2e-22 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || ||||| || |||||||| ||||| || || ||||||||||| || ||||| Sbjct 1053346 ACGGGAAAGACCATCACCCTTGAGGTTGAGTCTTCCGACACCATCGACAATGTCAAGAGC 1053405 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 |||||||||||||| || || || ||||| |||||||| || || ||||| || ||||| Sbjct 1053406 AAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTGATCTTTGCTGGAAAG 1053465 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 || || || ||||| | || || |||| || ||| | || || || || || || ||| Sbjct 1053466 CAACTTGAGGATGGTCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCCACGCTCCAT 1053525 Query 178125 CTTGT 178129 || || Sbjct 1053526 CTCGT 1053530 >seq18 Length=1930349 Score = 131 bits (144), Expect = 4e-25 Identities = 139/182 (76%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCAGACACC 177986 ||||| || || ||||| || || || ||||||||||||||||| ||| |||||| Sbjct 1554063 TTCGTCAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGAGC---GACACC 1554119 Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046 ||||| |||||||| ||||| |||||||| || || || || || ||||| || || Sbjct 1554120 ATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGT 1554179 Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106 || ||||| |||||||| ||||| || ||||| ||||||| ||| || ||| |||| Sbjct 1554180 CTGATCTTTGCCGGAAAGCAGCTTGAGGATGGCCGGACTCTGAGCGACTACAACATCCAG 1554239 Query 178107 AA 178108 || Sbjct 1554240 AA 1554241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730891543880