Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq15 131 2e-25 seq16 129 5e-25 seq18 125 7e-24 >seq15 Length=1704560 Score = 131 bits (144), Expect = 2e-25 Identities = 111/137 (81%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 || ||||| || ||||| | ||| || || || || ||||||||| ||||| |||||| Sbjct 828554 CCACCGCCACGGAGACGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCG 828613 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752 || |||||||| |||| || ||||||||||| ||||| ||||||||||| ||||| | | Sbjct 828614 GACAGGGTGCGGCCGTCTTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGG 828673 Query 41753 GGAACGCTCTCCTTGTC 41769 |||| || ||||||||| Sbjct 828674 GGAATGCCCTCCTTGTC 828690 >seq16 Length=1709166 Score = 129 bits (142), Expect = 5e-25 Identities = 169/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || ||||||| ||| ||||| || ||||| ||||| ||| Sbjct 1053776 CCACCACGCAGACGGAGAACAAGATGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAG 1053717 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| ||||||||||| || || || ||||||||||| ||||| | ||| Sbjct 1053716 AGAGTTCGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGA 1053657 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCT-TCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| | ||||| | ||| | | | |||||| || || | Sbjct 1053656 ATGCCCTCCTTGTCC-TGA-ATCTTGCTCTTGACGTTGTCGATGGTGTCGGAAGATTCAA 1053599 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || || |||||||| ||||| |||||||| Sbjct 1053598 CCTCAAGGGTGATGGTCTTTCCAGTGAGCGTCTTGACGAAGATCTGCAT 1053550 Score = 120 bits (132), Expect = 3e-22 Identities = 152/207 (73%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| ||||| |||||| ||||||||||||||| |||||||| Sbjct 1053548 CCACCACGCAGACGCAGCACGAGATGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGAC 1053489 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || || ||||| || || || ||||| ||||| ||||| | ||| Sbjct 1053488 AGGGTGCGACCATCCTCAAGTTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGA 1053429 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | || |||||||||| || || ||| || | || | |||||| ||||| | Sbjct 1053428 ATGCCCTCCTTGTCCTGAATCTTGCTCTTGACATTGTCG--ATGGTGTCGGAAGACTCAA 1053371 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCA 41840 |||| | || || || || ||||||| Sbjct 1053370 CCTCAAGGGTGATGGTCTTTCCCGTCA 1053344 >seq18 Length=1930349 Score = 125 bits (138), Expect = 7e-24 Identities = 142/188 (76%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 41667 TGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGG 41726 |||| ||||||| ||||| |||||| || || || | || || |||||||| |||| Sbjct 1554249 TGCTGACCTTCTGGATGTTGTAGTCGCTCAGAGTCCGGCCATCCTCAAGCTGCTTTCCGG 1554190 Query 41727 CGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCA 41786 | || ||||| ||||||||||| | ||||| || |||||||||| ||| || ||| Sbjct 1554189 CAAAGATCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTT-G 1554131 Query 41787 ACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTC 41845 ||| | | | |||||||||||||||||||| | || || || || ||||| || ||| Sbjct 1554130 ACGTTGTCGATGGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTC 1554071 Query 41846 TTTACGAA 41853 || ||||| Sbjct 1554070 TTGACGAA 1554063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303884424000