Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq10 168 8e-37 >seq10 Length=1111123 Score = 168 bits (186), Expect = 8e-37 Identities = 469/715 (66%), Gaps = 12/715 (2%) Strand=Plus/Plus Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010 |||||||| || || | |||| | | | || ||||| || | || ||||| | | | Sbjct 724354 TCAAACTCATCGCCGTAGACATCGGCAAGACCGGGACACTCGTTGGGGCACATTAGTGTC 724413 Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 54070 || |||| | | || || ||||| ||||||||||| |||||||| || | || Sbjct 724414 CAGGTACCGTTCTTTTCAACACGCTTCATGAAGAGATCAGGGATCCAAAGGGCAAGGAAG 724473 Query 54071 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 54130 || || | || | | |||||| || || |||||| ||||| | |||| | | Sbjct 724474 AGGTCACGGGCACGAACTTCCTCCTTGCCGTGGTTCTTTCGCAGATCCAAGAACTCGAAG 724533 Query 54131 ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCC 54190 | ||| || ||||| || || | ||| || | | | | ||||| || ||||| || || Sbjct 724534 ACATCCGAGTGCCATGGCTCAAGGTAGATAGCAAAAGCGCCAGGTCGCTTGTTACCACCT 724593 Query 54191 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 54250 ||||| | ||| | || ||||| || | || | ||||| |||| |||||||| ||| Sbjct 724594 TGATCGACGTAACGGGCTGTGTTGTTGAAGACACGTAACATGGGAACGATACCATTTGAT 724653 Query 54251 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATA----TTACTAATTGATAG 54306 | ||| ||||| |||| || || || |||| || ||| ||| ||| || Sbjct 724654 GTACCGTTGGTACCGGCAATGTAAGAGCCCGTGGCGCGGATACGGTGTAC--ATT--CAG 724709 Query 54307 ACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCC 54366 || || || || |||||||| || || | || ||| || | || || ||||| || Sbjct 724710 GCCGATTCCTCCGGCCATTTTGGAAATCATCGCACATGTCTTGAGAGTGTCGTAGATACC 724769 Query 54367 CTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT 54426 || || ||||||||| |||||| | | || || |||||||| | | || Sbjct 724770 TTCAATGCTATCATCCTTCATGTCGACCAAGAAGCAAGACGACATTTGAGGCTGTGGTGT 724829 Query 54427 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 54486 ||| ||||| || | ||||||||||| || || || | || || | || ||||| Sbjct 724830 TCCGGCATTGAACAGCGTAGGAGAAGCATGTGTGAAGTACTTGAGGGACATGAGGTTGTA 724889 Query 54487 CGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACAT 54546 ||||||| || || | || | ||| || || || |||||||| | ||| Sbjct 724890 GGTCTCGAGGACTTTCTCAACATTATCTCCCCAAATGCCAACAGCCACACGCATAATCAT 724949 Query 54547 GTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGT 54606 ||| || ||||| || || ||||| ||| || |||| | || ||| || | || Sbjct 724950 GTGTTGGGGTCTCTCGACAATCTTTCCGTTAATCTTCAAGAGATATGATCGCTCTAGCGT 725009 Query 54607 TTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACTGAGT 54659 |||||||| || || | ||| ||||| || || || || | ||| | |||| Sbjct 725010 CTTAAAACCGAAGTATTGGTAGTTGAAA--TCGCGGTCATATACAATGGCCGAGT 725062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593720828161920