Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq25 147 2e-30 seq28 143 3e-29 seq21 140 3e-28 seq45 134 1e-26 >seq25 Length=698551 Score = 147 bits (162), Expect = 2e-30 Identities = 146/189 (77%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 40691 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCG 40750 |||| || ||||| || || ||||||||||| ||||||||| |||| ||||| || ||| Sbjct 513634 TGCAGATCTTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCG 513693 Query 40751 ACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGC 40810 ||| | | | | ||||| || || | ||||| |||||||||||| |||| |||| Sbjct 513694 ACACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCAGC 513753 Query 40811 AACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 40870 | || ||||||| ||| || || ||||| || |||| || |||||| |||||||||| Sbjct 513754 AGCGTCTCATCTTCGCCGGAAAGCAGCTTGAAGACGGCCGAACCCTCTCAGACTACAACA 513813 Query 40871 TCCAGAAGG 40879 ||||||||| Sbjct 513814 TCCAGAAGG 513822 >seq28 Length=668342 Score = 143 bits (158), Expect = 3e-29 Identities = 262/376 (70%), Gaps = 6/376 (2%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 ||||||| || ||||| ||| |||||| ||| | | | | | |||| | | || | Sbjct 583606 AGAAGGCTGACTGGGCTCTGAAGTGGATCACCGACCGCAACTCTACTTTCGCCCAACGTC 583665 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | | |||||||| ||||| || || ||||||| || ||||||| |||| || | Sbjct 583666 TCATTGCCTTCGCCGCCGTTGAAGGTATCTTCTTCAGTGGTGCTTTCGCCTCCATTTTCT 583725 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||||||||| || || || |||||||| ||||||||| ||| ||||||||||| | | Sbjct 583726 GGCTCAAGAAGCGTGGTCTGATGCCCGGTCTGACTTTCTCCAATGAGCTCATCTCGCGTG 583785 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 ||||||| || ||| || |||||||| | |||| || ||| | | || || | Sbjct 583786 ACGAGGGCCTCCATACTGATTTTGCCTGCCTATTGTTTTCTCACTTGAAGAATCGGCCCA 583845 Query 117222 GCGCGGCGCGCGT-CAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTC 117280 || || | ||| ||| || || | ||| || || || ||||| || || Sbjct 583846 GCAAGGAACTCGTAGAGGCAG-TCATAGTCGATGCTGTTAAGATTGAGCAAGAATTTCTG 583904 Query 117281 ACCGAAGCGCTGCC-GGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACA 117338 || ||||| ||||| |||| |||||| || | || || || | ||| ||| |||| Sbjct 583905 ACAGAAGCCCTGCCTTGTGC-TCTGCTCGGGATGAA-CGCCAACCTCATGAAGCAGTACA 583962 Query 117339 TCGAGTTCGTCGCCGA 117354 |||||||||||||||| Sbjct 583963 TCGAGTTCGTCGCCGA 583978 Score = 120 bits (132), Expect = 3e-22 Identities = 181/257 (70%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| || |||||||| || |||||||||| |||||| | || || Sbjct 583203 ATCTGGCAAATGTACAAGAAAGCCGAGGCCTCCTTCTGGACCGCTGAGGAGATTGATTTG 583262 Query 116696 TCCAAGGACACGAGCGACTGG---GAGCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||||||| | ||||||| | | | ||||| ||||| | || ||| Sbjct 583263 TCCAAGGACCTGCACGACTGGAACAATAGAATCAACGAGGACGAGAAATACTTTATCTCC 583322 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||| | || || || || || ||| |||||| ||||| |||||||| || || |||||| Sbjct 583323 CACATCCTAGCTTTCTTTGCTGCCTCCGACGGTATCGTGAACGAGAACCTCGTTGAGCGT 583382 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| ||||| ||| | |||| || || ||||| || || || || ||| ||| Sbjct 583383 TTCAGCGGCGAGGTTCAGATTCCCGAAGCTCGATGCTTTTATGGTTTCCAAATCATGATG 583442 Query 116873 GAGAACGTGCACTCGGA 116889 ||||| | ||||| || Sbjct 583443 GAGAATATTCACTCCGA 583459 >seq21 Length=742638 Score = 140 bits (154), Expect = 3e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || |||||||| || || |||||| |||| || || | | | Sbjct 187869 ATGCAGATTTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTCGAGGTGGAGTCTAGC 187928 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| ||||| |||||| | |||||| Sbjct 187929 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAG 187988 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| ||||| || || | || |||||| |||||||||| Sbjct 187989 CAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACCCTCTCCGACTACAAC 188048 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| ||| || || || ||| |||| Sbjct 188049 ATCCAGAAGGAGAGCACCCTCCACCTCGTGCTGCG 188083 >seq45 Length=386842 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || || || ||||||||| | || |||||| | | Sbjct 238120 ATGCAAATCTTCGTCAAGACTCTTACCGGAAAGACCATCACCTTGGAGGTCGAATCATCA 238061 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||| ||||||| ||||| || |||||||| | |||||| Sbjct 238060 GACACGATCGACAATGTGAAGAGCAAAATTCAAGACAAGGAAGGCATCCCTCCTGACCAG 238001 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||||||||| || || || ||||| || |||| || || || | |||||||||| Sbjct 238000 CAGCGACTCATCTTTGCTGGTAAGCAGCTAGAGGACGGACGAACTCTAAGCGACTACAAC 237941 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 || ||||||||| | |||||||| | ||| | || ||| | || || Sbjct 237940 ATTCAGAAGGAGTCTACGCTGCACTTGGTGCTTCGGTTGCGTGGTGG 237894 Score = 118 bits (130), Expect = 1e-21 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | |||||||| |||||||| | || || ||| || | Sbjct 237892 ATGCAGATCTTCGTCAAGACATTGACGGGCAAGACCATCACATTGGAAGTAGAATCCTCA 237833 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | ||| || || | ||||| || || || || | ||||| Sbjct 237832 GACACCATTGACAACG-TGAAGAGCAAGATCCAAGACAAGGAAGGTATTCCTCCTGACCA 237774 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || |||||||| || | |||||||| | ||| ||||| Sbjct 237773 GCAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGATGGTCGCACCCTGAGCGATTACAA 237714 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | || || || Sbjct 237713 CATCCAGAAGGAGTCTACCCTCCA 237690 Score = 116 bits (128), Expect = 4e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 40702 GTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAA 40761 || || || || || || || ||||||||| |||| || || || |||||| | | Sbjct 238336 GTCAAGACCCTAACTGGAAAGACCATCACCCTCGAGGTGGAGTCCTCCGACACTATTGAC 238277 Query 40762 ACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATC 40821 | ||||| || || | |||||||| |||||||| | |||||||| || | ||| Sbjct 238276 AATGTCAAGTCGAAGATCCAGGACAAAGAAGGCATCCCTCCCGACCAGCAGCGTTTGATC 238217 Query 40822 TACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAG 40881 | ||| ||||| || || || |||| || ||||||| ||||||||||||||| ||||| Sbjct 238216 TTCGCCGGCAAGCAACTCGAAGACGGCCGAACCCTCAGCGACTACAACATCCAAAAGGAA 238157 Query 40882 GCCACGCTGCATCTAGTGTTGCGC 40905 |||| || || || || ||||| Sbjct 238156 TCCACTCTCCACCTTGTCCTGCGC 238133 Score = 96.9 bits (106), Expect = 4e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| || || || |||||| | || || || || || Sbjct 238631 ATGCAGATCTTCGTCAAGACTCTCACCGGTAAGACTATCACCTTGGAGGTGGAGTCCTCC 238572 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | ||||| || |||| ||||| || || || || | |||||| Sbjct 238571 GATACCATCGACAATGTCAAGTCGAAGATTCAGGACAAGGAAGGTATTCCTCCTGACCAG 238512 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| | || | ||| || || || || || || | |||||| | |||||||||| Sbjct 238511 CAACGCTTGATTTTCGCCGGAAAGCAACTTGAAGATGGTCGCACCTTGTCCGACTACAAC 238452 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| ||| || || Sbjct 238451 ATCCAGAAGGAGAGCACCCTCCA 238429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218530215040