Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq45 86.0 9e-12 >seq45 Length=386842 Score = 86.0 bits (94), Expect = 9e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| || || || || || || || | ||| | ||| || Sbjct 238120 ATGCAAATCTTCGTCAAGACTCTTACCGGAAAGACCATCACCTTGGAGGTCGAATCATCA 238061 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || ||| | || ||||||||||| || ||||| || || ||||| || Sbjct 238060 GACACGATCGACAATGTGAAGAGCAAAATTCAAGACAAGGAAGGCATCCCTCCTGACCAG 238001 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || || ||||| || || || ||||||| | ||||| || || || || Sbjct 238000 CAGCGACTCATCTTTGCTGGTAAGCAGCTAGAGGACGGACGAACTCTAAGCGACTACAAC 237941 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || || || || |||| ||||| | || || || |||||||| Sbjct 237940 ATTCAGAAGGAGTCTACGCTGCACTTGGTGCTTCGGTTGCGTGGTGGTAT 237891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755455017907200