Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq45 141 8e-29 seq25 107 2e-18 seq21 102 7e-17 >seq45 Length=386842 Score = 141 bits (156), Expect = 8e-29 Identities = 171/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || || | | ||||||||| | |||||||| || ||||||||||| |||| Sbjct 237892 TACCACCACGCAACCGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGC 237951 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | | ||| || ||||| ||||| || ||||| ||||||| |||||||| || |||| Sbjct 237952 TTAGAGTTCGTCCGTCCTCTAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCAGGAG 238011 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688 | ||||| ||||||||| |||||| || || | |||| ||||| | || | ||| Sbjct 238012 GGATGCCTTCCTTGTCTTGAATTTTGCTCTTCACATTGTCGATCGTGTCTGATGAT-TCG 238070 Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| | ||| | || || ||||| ||||| || || || || ||||| Sbjct 238071 ACCTCCAAGGTGATGGTCTTTCCGGTAAGAGTCTTGACGAAGATTTGCAT 238120 Score = 136 bits (150), Expect = 3e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||||| |||||||| || || |||||||||||||||| ||||| |||||| Sbjct 237683 CACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCATCCTC 237742 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || |||||| |||||||||||||||| || ||||| || || ||||||||| Sbjct 237743 CAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCTTG 237802 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | || | |||||| | | || || || | || | || || Sbjct 237803 GATCTTGCTCTTCACGTTGTCAATGGTGTCTGAGGATTCTACTTCCAATGTGATGGTCTT 237862 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| |||| || || || || |||||||| Sbjct 237863 GCCCGTCAATGTCTTGACGAAGATCTGCAT 237892 >seq25 Length=698551 Score = 107 bits (118), Expect = 2e-18 Identities = 116/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 || || ||||| ||||| ||| ||||||||||||||||||| || || |||||||||||| Sbjct 513787 TCTTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTG 513728 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || || || || || | |||| |||||| | | ||||||||||| ||| | Sbjct 513727 TCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATG 513668 Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCA 118737 || ||||| || || || || || || ||||||| Sbjct 513667 GTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCA 513634 >seq21 Length=742638 Score = 102 bits (112), Expect = 7e-17 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||| | ||||| || ||| || || |||||||| ||| | || || ||| Sbjct 188081 CAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATC 188022 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||||||||| || || ||| |||| ||||||||||| || || || || ||||||||||| Sbjct 188021 CTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTC 187962 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 || || || || | |||| |||||| | ||| ||||||| ||| | || Sbjct 187961 CTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTAGACTCCACCTCGAGGGTGATAGT 187902 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || || || || || || || |||||||||||| Sbjct 187901 CTTACCCGTGAGGGTCTTGACGAAAATCTGCATG 187868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829850119968