Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq28 91.5 1e-13 >seq28 Length=668342 Score = 91.5 bits (100), Expect = 1e-13 Identities = 198/294 (67%), Gaps = 3/294 (1%) Strand=Plus/Minus Query 16505 ATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGA 16564 ||||| ||||| || ||||| || | || || |||||||||||||| || || Sbjct 583489 ATATAGGTATCAATGAGTAAGGAGTATGTCTCGGAGTGAATATTCTCCATCATGATTTGG 583430 Query 16565 AAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAG 16624 |||||||||||||||| |||||||| || || || || | || | || | | | Sbjct 583429 AAACCATAAAAGCATCGAGCTTCGGGAATCTGAACCTCGCCGCTGAAACGCTCAACGAGG 583370 Query 16625 TTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAttt 16684 || ||||| || || || ||| || ||||| || || || ||||| ||||| | | Sbjct 583369 TTCTCGTTCACGATACCGTCGGAGGCAGCAAAGAAAGCTAGGATGTGGGAGATAAAGTAT 583310 Query 16685 ttttCGTTATC--TGAAAGT-TTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCT 16741 || |||| || ||| | || |||||| | || || || ||||| | ||| Sbjct 583309 TTCTCGTCCTCGTTGATTCTATTGTTCCAGTCGTGCAGGTCCTTGGACAAATCAATCTCC 583250 Query 16742 TCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACATTTTCCATATGTCTTCG 16795 || | ||||| || || || | || || || ||||||| ||| || | |||| Sbjct 583249 TCAGCGGTCCAGAAGGAGGCCTCGGCTTTCTTGTACATTTGCCAGATCTATTCG 583196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511398734400