Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq11 107 4e-18 seq55 87.8 4e-12 >seq11 Length=1001915 Score = 107 bits (118), Expect = 4e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 254017 TCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAACCCTGT 254076 || |||| || ||||| ||||| ||||| || || ||||| || || ||||| | | | Sbjct 226462 TCTACGGCCCCCCCGGCACAGGAAAGACATCTACGATCCTAGCTCTCGCCCGGAGGATAT 226403 Query 254077 TGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAACGCGGGT 254136 || ||| ||||||| || || ||||||||||| ||||| || ||||| ||||| Sbjct 226402 ACGGACAGGAGAACATGCGACAGATGGTGCTCGAGCTCAACGCCTCCGACGACCGCGGCA 226343 Query 254137 TGGACGTCGTCCGCGACAAGATCAAGACTTTC 254168 | |||||||| ||||| |||||||||| ||| Sbjct 226342 TCGACGTCGTGCGCGAGCAGATCAAGACGTTC 226311 >seq55 Length=293061 Score = 87.8 bits (96), Expect = 4e-12 Identities = 126/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261 || || || || ||| || | ||||| ||||| || || | ||||||| || |||||| Sbjct 136909 TGCCCACCCTTTAAGATCATCATCCTCGACGAAGCCGATAGCATGACGCAGGATGCGCAG 136850 Query 254262 TCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGC 254321 || || |||||||| |||||||| || | | || ||||| || || | ||| Sbjct 136849 AGTGCGCTTCGCCGAACAATGGAGACTTACAGCAAGATCACCCGTTTCTGTCTTATCTGC 136790 Query 254322 AACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 |||||||| | ||||||| |||||| ||| ||| ||| |||||| || |||| Sbjct 136789 AACTACGTCACTCGCATCATCGACCCGCTCGCTAGTCGTTGCAGCAAGTTCCGCTTCA 136732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073764969206272