Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq45 141 7e-29 seq21 113 4e-20 >seq45 Length=386842 Score = 141 bits (156), Expect = 7e-29 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || |||||||||||||| |||||||||||| || |||| | || || Sbjct 238423 ACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGACCATCTTCA 238482 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| ||||||||||| ||||| || || ||||| ||||| | ||| ||||||||| | Sbjct 238483 AGTTGCTTTCCGGCGAAAATCAAGCGTTGCTGGTCAGGAGGAATACCTTCCTTGTCCTGA 238542 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | || ||||||||||| ||| || ||||| Sbjct 238543 ATCTTCGACTTGACATTGTCGATGGTATCGGAGGACTCCACCTCCAAGGTGATAGTCTTA 238602 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 || || |||||||| || ||||| |||||| || Sbjct 238603 CCGGTGAGAGTCTTGACGAAGATCTGCATGATG 238635 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| | ||| | | |||||||||||||| |||||||||||||||||||||| | Sbjct 237894 CCACCACGCAACCGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGCTT 237953 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || || |||| || || || || || || || || | ||||| ||||| ||||| Sbjct 237954 AGAGTTCGTCCGTCCTCTAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCAGGAGGG 238013 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || |||||||| |||||| ||| || | | |||| || ||| Sbjct 238014 ATGCCTTCCTTGTCTTGAATTTTGCTCTTCACATTGTCGATCGTGTCTGATGATTCGACC 238073 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| ||| || ||||| || || |||||||| || ||||||||||| Sbjct 238074 TCCAAGGTGATGGTCTTTCCGGTAAGAGTCTTGACGAAGATTTGCAT 238120 >seq21 Length=742638 Score = 113 bits (124), Expect = 4e-20 Identities = 153/212 (72%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || |||||||||||||| |||||||||||| || || | || || || || Sbjct 188072 GTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCGAGCTG 188013 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| |||| ||||| ||||| || || | |||||||||||| || || Sbjct 188012 CTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCCTGGATCTT 187953 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | | ||||||||| | ||| || ||||| ||||| Sbjct 187952 GGACTTGACATTGTCGATGGTGTCGCTAGACTCCACCTCGAGGGTGATAGTCTTACCCGT 187893 Query 45313 CAGAGTCTTCACAAAGATTTGCATG-TTGCCT 45343 || ||||| || || || |||||| |||||| Sbjct 187892 GAGGGTCTTGACGAAAATCTGCATGATTGCCT 187861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074699242184