Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq10 165 1e-35 >seq10 Length=1111123 Score = 165 bits (182), Expect = 1e-35 Identities = 455/689 (66%), Gaps = 24/689 (3%) Strand=Plus/Plus Query 71974 CCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTT--ACTCGTTTCA 72031 || ||||| || || || ||||| | || ||| || | || ||| || || |||| Sbjct 724384 CCGGGACACTCGTTGGGGCACATTAGTGTCCAGGTACCGT--TCTTTTCAACACGCTTCA 724441 Query 72032 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTC 72091 | ||||||||||| |||||||| || | || || || | || | | ||||| || | Sbjct 724442 TGAAGAGATCAGGGATCCAAAGGGCAAGGAAGAGGTCACGGGCACGAACTTCCTCCTTGC 724501 Query 72092 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 72151 | |||||| ||||| | |||| | | | ||| || ||||| || || | ||| | Sbjct 724502 CGTGGTTCTTTCGCAGATCCAAGAACTCGAAGACATCCGAGTGCCATGGCTCAAGGTAGA 724561 Query 72152 TGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 72211 | || | | | || || || ||||| || || ||||| | ||| | || ||||| || Sbjct 724562 TAGCAAAAGCGCCAGGTCGCTTGTTACCACCTTGATCGACGTAACGGGCTGTGTTGTTGA 724621 Query 72212 AAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTC 72271 | || | ||||| |||| |||||||| |||| ||| ||||| |||| || || | Sbjct 724622 AGACACGTAACATGGGAACGATACCATTTGATGTACCGTTGGTACCGGCAATGTAAGAGC 724681 Query 72272 CACTGGCACGAATA--TTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 72329 | |||| || ||| || ||| || || ||||| || |||||||| || || | Sbjct 724682 CCGTGGCGCGGATACGGTGTACATT--CAGGCCGATTCCTCCGGCCATTTTGGAAATCAT 724739 Query 72330 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 72389 || ||| || | || || ||||| || || || ||||||||| |||||| | | Sbjct 724740 CGCACATGTCTTGAGAGTGTCGTAGATACCTTCAATGCTATCATCCTTCATGTCGACCAA 724799 Query 72390 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 72449 || || |||||||| | | ||||| ||||| || | ||||||||||| || Sbjct 724800 GAAGCAAGACGACATTTGAGGCTGTGGTGTTCCGGCATTGAACAGCGTAGGAGAAGCATG 724859 Query 72450 CGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG 72509 || || | || |||| || ||||| ||||| | || |||| | |||| Sbjct 724860 TGTGAAGTACTTGAGGGACATGAGGTTGTAGGTCTCGAGGACT--TTCTCAA---CATT- 724913 Query 72510 ATGT------ATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTT 72563 || | || || || || |||||||| | ||| || || ||||| || || ||||| Sbjct 724914 ATCTCCCCAAATGCCAACAGCCACACGCATAATCATGTGTTGGGGTCTCTCGACAATCTT 724973 Query 72564 GTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--T 72621 || || ||||| | || ||| || | || |||||||| || || | ||| | Sbjct 724974 TCCGTTAATCTTCAAGAGATATGATCGCTCTAGCGTCTTAAAACCGAAGTATTGGTAGTT 725033 Query 72622 GAAAAGTCTCGTTCGTAAATAATAACCGA 72650 |||| || || || || | ||| |||| Sbjct 725034 GAAA--TCGCGGTCATATACAATGGCCGA 725060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138327519040