Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq45 114 1e-20 >seq45 Length=386842 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 142955 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 143014 ||||| || || | ||| | || || || | ||||| || || || |||||||||||| Sbjct 237663 TGGCCGCCACGAAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCG 237722 Query 143015 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074 |||| |||| || || || || |||||||| |||| ||||| ||||| || ||| Sbjct 237723 CTCAGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGA 237782 Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134 || || ||||| ||||| || || || | | || | ||||| | || |||| Sbjct 237783 GGAATACCTTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCAATGGTGTCTGAGGATTCT 237842 Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||||| | || | |||||||| |||||||| || ||||| || |||||| Sbjct 237843 ACTTCCAATGTGATGGTCTTGCCCGTCAATGTCTTGACGAAGATCTGCATA 237893 Score = 93.3 bits (102), Expect = 4e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || ||||| ||||| |||||||| ||||| | || | |||||||||||| || || Sbjct 238152 GTGGATTCCTTTTGGATGTTGTAGTCGCTGAGGGTTCGGCCGTCTTCGAGTTGCTTGCCG 238211 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 143091 || |||||| ||| ||||| |||||||| |||||||||||||| Sbjct 238212 GCGAAGATCAAACGCTGCTGGTCGGGAGGGATGCCTTCTTTGTC 238255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507013740881280