Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq10 147 3e-30 seq28 131 2e-25 >seq10 Length=1111123 Score = 147 bits (162), Expect = 3e-30 Identities = 331/489 (68%), Gaps = 14/489 (3%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 || || || || || || || |||||| | || ||||| | || || |||||| |||| Sbjct 724595 CAAGGTGGTAACAAGCGACCTGGCGCTTTTGCTATCTACCTTGAGCCATGGCACTCGGAT 724536 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || | || |||| || ||| ||| || || | || ||| | ||| Sbjct 724535 GTCTTCGAGTTCTTGGATCTGCGAAAGAACCACGGCAAGGAGGAAGTTCGTGCCCGTGAC 724476 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC---AACGACGGTGGC 97052 | || ||| || ||| | || ||| | ||||||||||| || || ||||| | Sbjct 724475 CTCTTCCTTGCCCTTTGGATCCCTGATCTCTTCATGAAGCGTGTTGAAAAGAACGGTACC 724416 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 | ||| |||||||||||| || || |||||||| ||||| || ||||| ||| Sbjct 724415 T---GGACACTAATGTGCCCCAACGAGTGTCCCGGTCTTGCCGATGTCTACGGCGATGAG 724359 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATAC-GTGAGACGAGTCGATGC 97171 ||||||||| ||| | |||||| ||||| || | | | ||| || | || Sbjct 724358 TTTGAGGCCCTCTACGAGAAGTACGAGGCCGAGGGTCGCGGCCGCCAAACG-GTTAAGGC 724300 Query 97172 ACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230 | |||| || ||| | ||||| | ||||||| ||||| |||| |||| ||| | Sbjct 724299 TC-AGAAGCTTTGGTATGCCATTCTAGAGGCTCAGACCGAGACCGGAAACCCGTTCATGC 724241 Query 97231 TCTACAAGGATACCGTG--AATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGG 97288 ||||||||| ||| || || ||||| |||||||| || |||| || ||| | Sbjct 724240 TCTACAAGG--ACCATGCCAACCGCAAGAGCAACCAGAAGAACCTGGGTACGATCCGTAG 724183 Query 97289 CTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGT 97348 || ||||| ||||| || || | |||||| || |||||||||| || |||||| Sbjct 724182 TTCTAATCTCTGCACTGAGATCATCGAGTACTCCGCTCCGGACGAAGTCGCCGTTTGCAA 724123 Query 97349 TCTGGCATC 97357 | |||| || Sbjct 724122 TTTGGCCTC 724114 >seq28 Length=668342 Score = 131 bits (144), Expect = 2e-25 Identities = 200/280 (71%), Gaps = 4/280 (1%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| || || |||||||||| ||||| | || ||| | ||| || Sbjct 583203 ATCTGGCAAATGTACAAGAAAGCCGAGGCCTCCTTCTGGACCGCTGAGGAGATTGATTTG 583262 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||||||| |||| ||| | | | | | | || ||| | | ||||| || Sbjct 583263 TCCAAGGACCTGCACGACTGGAACAATAGAATCAACGAGGACGAGAAATACTTTATCTCC 583322 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||||| | || |||||||| | |||||| || ||||| ||||| || || ||||| || Sbjct 583323 CACATCCTAGCTTTCTTTGCTGCCTCCGACGGTATCGTGAACGAGAACCTCGTTGA-GCG 583381 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGA 125256 ||| ||| | ||||| || | ||| |||||||| || ||||||||||||| Sbjct 583382 TTTCAGCGGCGAGGTTCAGATTCCCGAAG-CTCGATGCTTTTATGGTTTCCAAATCATGA 583440 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGA 125296 | ||||| | ||||| || | ||||| ||| ||||| Sbjct 583441 TGGAGAATATTCACTCCGAGACATACTCCTTACTCATTGA 583480 Score = 107 bits (118), Expect = 3e-18 Identities = 328/500 (66%), Gaps = 19/500 (4%) Strand=Plus/Plus Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420 || || || |||||| | |||| | ||||||| ||| ||| ||| | | |||| Sbjct 583599 ATTCGCAAGAAGGCTGACTGGGCTCTGAAGTGGATCACCGACCGCAACTCTACTTTCGCC 583658 Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480 | | || | || ||||||||||| || || |||||||| ||| ||| || || Sbjct 583659 CAACGTCTCATTGCCTTCGCCGCCGTTGAAGGTATCTTCTTCAGTGGTGCTTTCGCCTCC 583718 Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540 || || |||||||||||||| || || |||||||| ||||| | || ||| | || Sbjct 583719 ATTTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGTCTGACTTTCTCCAATGAGCTCATC 583778 Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGT 125600 || || ||||||||||| || ||| |||||| ||| ||||| ||| || Sbjct 583779 TCGCGTGACGAGGGCCTCCATACTGATTTTGCCTGCCTATTGTTTTCTCACT---TG--- 583832 Query 125601 CCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACA-TTGTAACCGATGCCGTGAGGAT 125659 || | ||||| | ||| || | || | || |||||| || | ||| Sbjct 583833 ---AAGAATCGGCCCAGCAAGGAACTCGT-AGAGGCAGTCATAGTCGATGCTGTTAAGAT 583888 Query 125660 AGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGC-ATGATTGGCATGAACTGCAAGC 125718 || ||||| ||||| || ||| |||| || | || || | || |||||| ||| | Sbjct 583889 TGAGCAAGAATTTCTGACAGAAGCCCTGCC-TTGTGCTCTGCTCGGGATGAACGCCAACC 583947 Query 125719 TAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC---C 125775 | ||| ||||||| ||||| || || |||||| | || || | | ||| Sbjct 583948 TCATGAAGCAGTACATCGAGTTCGTCGCCGATCGTTTGCTTGTCGCTT---TAGGCAATG 584004 Query 125776 GCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTA 125835 |||| | ||| | | | |||||||| ||||| ||| | ||| || || | || | Sbjct 584005 ACAAGGTCTACCGCTCGACTAATCCCTTCGATTTTATGGAGAACATCTCGCTCGGTGGCA 584064 Query 125836 AGACCAACTTTTTCGAGAAG 125855 |||| ||||| ||||| ||| Sbjct 584065 AGACAAACTTCTTCGAAAAG 584084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058236623040