Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq28 111 1e-19 >seq28 Length=668342 Score = 111 bits (122), Expect = 1e-19 Identities = 194/279 (70%), Gaps = 5/279 (2%) Strand=Plus/Minus Query 13421 ATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGG 13480 ||||| ||||| || | |||| || | || || |||||||| |||||| |||||| Sbjct 583489 ATATAGGTATCAATGAGTAAGGAGTATGTCTCGGAGTGAATATTCTCCATCATGATTTGG 583430 Query 13481 AAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAG 13540 ||||||||||| |||| ||| || | | |||||| ||| | || | || | | | Sbjct 583429 AAACCATAAAAGCATCGAGCTTCGGGAATCTGAACCTCGCCGCTGAAACGCTCAACGAGG 583370 Query 13541 TTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAtttt 13600 || ||||| || || ||||| |||||||| ||||| || ||||| ||||| | | Sbjct 583369 TTCTCGTTCACGATACCGTCGGAGGCAGCAAAGAAAGCTAGGATGTGGGAGATAAAGTAT 583310 Query 13601 ttttCGTTTTC--TGA--CAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTC 13656 || |||| || ||| | | || ||| || | | || || || ||||| | ||| Sbjct 583309 TTCTCGTCCTCGTTGATTCTA-TTGTTCCAGTCGTGCAGGTCCTTGGACAAATCAATCTC 583251 Query 13657 CTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATACAT 13695 |||| ||||||| || || || | || ||||| ||||| Sbjct 583250 CTCAGCGGTCCAGAAGGAGGCCTCGGCTTTCTTGTACAT 583212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430981853729808