Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq45 120 7e-22 seq21 114 3e-20 >seq45 Length=386842 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| || || ||||| || | || | ||| ||||| ||||| ||||| || ||| Sbjct 238441 TCCTTCTGGATGTTGTAGTCGGACAAGGTGCGACCATCTTCAAGTTGCTTTCCGGCGAAA 238500 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || | | || || |||||||| || ||||| || ||||||||||| | || ||||| Sbjct 238501 ATCAAGCGTTGCTGGTCAGGAGGAATACCTTCCTTGTCCTGAATCTTCGACTTGACATTG 238560 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | ||||||| | || ||||| | || ||||||||||| || || || || || Sbjct 238561 TCGATGGTATCGGAGGACTCCACCTCCAAGGTGATAGTCTTACCGGTGAGAGTCTTGACG 238620 Query 104549 AATATCTGCAT 104559 || |||||||| Sbjct 238621 AAGATCTGCAT 238631 >seq21 Length=742638 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| || || ||||| || || || | || || || || || || || || || Sbjct 188059 TCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAG 188000 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | ||| || ||||| || ||||| || || ||||| ||||| | || ||||| Sbjct 187999 ATCAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 187940 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | ||| ||||||| || ||||| || || ||||||||||| || || || || || Sbjct 187939 TCGATGGTGTCGCTAGACTCCACCTCGAGGGTGATAGTCTTACCCGTGAGGGTCTTGACG 187880 Query 104549 AATATCTGCAT 104559 || |||||||| Sbjct 187879 AAAATCTGCAT 187869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151396865761632