Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq45 116 3e-21 seq21 96.9 3e-15 seq25 84.2 2e-11 >seq45 Length=386842 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 || ||||||| | | || || || || ||||||||||| || |||||||| || | | Sbjct 238405 CCACCGCGCAGACGCAGGACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 238464 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 || || | || || || ||||| ||| || |||| || || ||||| || || Sbjct 238465 AAGGTGCGACCATCTTCAAGTTGCTTTCCGGCGAAAATCAAGCGTTGCTGGTCAGGAGGA 238524 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | || |||||||||| ||| ||| ||||| | | |||||||||| |||||| | Sbjct 238525 ATACCTTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCGGAGGACTCCACC 238584 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || || || |||||||||||||| || || || |||||||| Sbjct 238585 TCCAAGGTGATAGTCTTACCGGTGAGAGTCTTGACGAAGATCTGCAT 238631 >seq21 Length=742638 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 || || ||||||||||| || |||||||| || | | || | ||||| |||||| Sbjct 188071 TGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCGAGCTGC 188012 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || ||| || | || | ||||||||| || || | | ||||||||| || || Sbjct 188011 TTGCCGGCGAAGATCAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCCTGGATCTTG 187952 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||||| | | ||||| ||| |||||||| ||||| || || || ||||| ||| Sbjct 187951 GACTTGACATTGTCGATGGTGTCGCTAGACTCCACCTCGAGGGTGATAGTCTTACCCGTG 187892 Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726 || || || || ||||||||||| Sbjct 187891 AGGGTCTTGACGAAAATCTGCAT 187869 >seq25 Length=698551 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 48537 CCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAA 48596 |||| || |||||||| || | | ||| |||| || |||||||| ||| || | | Sbjct 513822 CCTTCTGGATGTTGTAGTCTGAGAGGGTTCGGCCGTCTTCAAGCTGCTTTCCGGCGAAGA 513763 Query 48597 TTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACG 48656 | | ||||||||||||| || | | ||||||||| || || ||||| | Sbjct 513762 TGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 513703 Query 48657 CTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAA 48716 | ||||| |||| ||||| ||||| || ||||| || || ||||| || ||||| | Sbjct 513702 CGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGA 513643 Query 48717 AAATCTGCA 48725 | ||||||| Sbjct 513642 AGATCTGCA 513634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250666064104