Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq45 120 3e-22 >seq45 Length=386842 Score = 120 bits (132), Expect = 3e-22 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || | ||| || | ||||||||||| ||||| ||||| || | ||| || ||||| Sbjct 237894 CCACCACGCAACCGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGCT- 237952 Query 94841 ATAGTGTTGG--AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 ||| ||| | ||||| ||||| || || ||||||| | || ||||| || |||| Sbjct 237953 -TAGAGTTCGTCCGTCCTCTAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCAGGAG 238011 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 | || ||||| ||||| | |||||| ||| || | ||| ||||| | |||| Sbjct 238012 GGATGCCTTCCTTGTCTTGAATTTTGCTCTTCACATTGTCGATCGTGTCTGATGATTCGA 238071 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | |||||||| ||||| |||||||| || || ||||| ||||| Sbjct 238072 CCTCCAAGGTGATGGTCTTTCCGGTAAGAGTCTTGACGAAGATTTGCAT 238120 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||| | ||||| ||||| || | ||| |||||||||| ||| |||||| Sbjct 237683 CACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCATCCTC 237742 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||| || || | ||||| | | ||||| || |||||||||||||| ||||| | Sbjct 237743 CAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCTTG 237802 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||| ||| | | | ||||| | | || || || | |||||||| || Sbjct 237803 GATCTTGCTCTTCACGTTGTCAATGGTGTCTGAGGATTCTACTTCCAATGTGATGGTCTT 237862 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | || || || ||||||||||| Sbjct 237863 GCCCGTCAATGTCTTGACGAAGATCTGCAT 237892 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| |||||||| | || ||||| || | ||| || ||| || ||| | Sbjct 238417 CGCAGGACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGACCA 238476 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || || || || |||||| | || || || | |||||| || |||||||||||||| ||| Sbjct 238477 TCTTCAAGTTGCTTTCCGGCGAAAATCAAGCGTTGCTGGTCAGGAGGAATACCTTCCTTG 238536 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || | |||||| | ||| || || | | || || || | ||||| Sbjct 238537 TCCTGAATCTTCGACTTGACATTGTCGATGGTATCGGAGGACTCCACCTCCAAGGTGATA 238596 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 || || || || ||||| || || |||||||||||| Sbjct 238597 GTCTTACCGGTGAGAGTCTTGACGAAGATCTGCATG 238632 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| || | ||| | ||| ||||||||||| | ||| || ||||| | || | Sbjct 238134 CGCAGGACAAGGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGCTGAGGGTTCGGCCG 238193 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || || || || || ||| | ||||| || | ||||| || ||||| || ||||||||| Sbjct 238194 TCTTCGAGTTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGAGGGATGCCTTCTTTG 238253 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || | |||||| | | | |||||| | | || || || | |||||| Sbjct 238254 TCCTGGATCTTCGACTTGACATTGTCAATAGTGTCGGAGGACTCCACCTCGAGGGTGATG 238313 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAA 94997 || |||||||| || || || |||| Sbjct 238314 GTCTTTCCAGTTAGGGTCTTGACAA 238338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290617221440