Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq5 105 1e-18 seq1 105 1e-18 >seq5 Length=1427630 Score = 105 bits (116), Expect = 1e-18 Identities = 85/100 (85%), Gaps = 2/100 (2%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||| |||||| || |||||||| || ||||| ||||| |||| Sbjct 1416866 CGCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACAAAGCCCGCTA 1416924 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 |||| ||||| || ||||||||||| ||||||||| |||| Sbjct 1416925 TCCGACGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTC 1416964 >seq1 Length=2109255 Score = 105 bits (116), Expect = 1e-18 Identities = 124/165 (75%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||||||||||| || | |||| | ||| ||||||| || ||| ||| |||| Sbjct 1730267 TGATCTATGAAGAGACCCGCGGTGTTCTCAAGTCCTTCCTCGAGGGCGTCATCAGAGATG 1730208 Query 16596 CT-TTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTAT 16654 | || || ||||| |||||||| || || ||||| ||||| || | ||| ||||||| Sbjct 1730207 CGGTTACA-TATACAGAGCACGCCAAGCGCAAGACAGTCACATCTCTCGATGTCGTCTAC 1730149 Query 16655 GCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 || |||| || || ||||||| ||||||||||||| ||||| Sbjct 1730148 GCGCTGAAGCGACAGGGCCGTACCCTTTATGGTTTTGGTGGTTAA 1730104 Score = 95.1 bits (104), Expect = 2e-15 Identities = 82/99 (83%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | ||| ||| || || |||||||| || || |||||||| ||||| Sbjct 1730437 GCCAAGCGCCACCGAAAGAT-TCTCCGTGACAACATCCAGGGTATTACCAAGCCCGCTAT 1730379 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| |||||||||||||| ||||||||| |||| Sbjct 1730378 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTC 1730340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075104912072