Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq10 192 7e-44 seq28 98.7 1e-15 >seq10 Length=1111123 Score = 192 bits (212), Expect = 7e-44 Identities = 474/715 (66%), Gaps = 12/715 (2%) Strand=Plus/Plus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 || ||||| || || | |||| | | | || ||||| || | || ||||| | | | Sbjct 724354 TCAAACTCATCGCCGTAGACATCGGCAAGACCGGGACACTCGTTGGGGCACATTAGTGTC 724413 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257 || |||| | | || || ||||| ||||||||||| |||||||| || | || Sbjct 724414 CAGGTACCGTTCTTTTCAACACGCTTCATGAAGAGATCAGGGATCCAAAGGGCAAGGAAG 724473 Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317 || || | || | | |||||| || || |||||| ||||| | |||| | | Sbjct 724474 AGGTCACGGGCACGAACTTCCTCCTTGCCGTGGTTCTTTCGCAGATCCAAGAACTCGAAG 724533 Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377 | ||| || ||||| || || | ||| || || | | | ||||| || ||||| || || Sbjct 724534 ACATCCGAGTGCCATGGCTCAAGGTAGATAGCAAAAGCGCCAGGTCGCTTGTTACCACCT 724593 Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437 ||||| | ||| | || ||||| || | || | ||||| |||| ||||| |||||| Sbjct 724594 TGATCGACGTAACGGGCTGTGTTGTTGAAGACACGTAACATGGGAACGATACCATTTGAT 724653 Query 63438 ATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATA----TTACTAATTGATAG 63493 |||| |||||||||| || || || |||| || ||| ||| ||| || Sbjct 724654 GTACCGTTGGTACCGGCAATGTAAGAGCCCGTGGCGCGGATACGGTGTAC--ATT--CAG 724709 Query 63494 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACC 63553 || ||||| || |||||||| || || | || ||| || | ||||| |||||||| Sbjct 724710 GCCGATTCCTCCGGCCATTTTGGAAATCATCGCACATGTCTTGAGAGTGTCGTAGATACC 724769 Query 63554 CTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT 63613 || ||||||||||| |||||| | | || || |||||||| | | || Sbjct 724770 TTCAATGCTATCATCCTTCATGTCGACCAAGAAGCAAGACGACATTTGAGGCTGTGGTGT 724829 Query 63614 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 63673 ||| ||||| || | ||||||||||| || || || | || || | || ||||| Sbjct 724830 TCCGGCATTGAACAGCGTAGGAGAAGCATGTGTGAAGTACTTGAGGGACATGAGGTTGTA 724889 Query 63674 CGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACAT 63733 ||||| | || || | || | ||| || || || |||||||| | ||| Sbjct 724890 GGTCTCGAGGACTTTCTCAACATTATCTCCCCAAATGCCAACAGCCACACGCATAATCAT 724949 Query 63734 GTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGT 63793 ||| || ||||| || || ||||| ||| || ||||| | || ||| || | || Sbjct 724950 GTGTTGGGGTCTCTCGACAATCTTTCCGTTAATCTTCAAGAGATATGATCGCTCTAGCGT 725009 Query 63794 TTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGT 63846 |||||||| || || | ||| ||||| || || || || | ||| |||||| Sbjct 725010 CTTAAAACCGAAGTATTGGTAGTTGAAA--TCGCGGTCATATACAATGGCCGAGT 725062 >seq28 Length=668342 Score = 98.7 bits (108), Expect = 1e-15 Identities = 288/441 (65%), Gaps = 2/441 (0%) Strand=Plus/Minus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 || ||||| ||||| || || |||||||| || || || || || | | || || || Sbjct 584104 TTCTGGTAATCACCAACGCGCTTTTCGAAGAAGTTTGTCTTGCCACCGAGCGAGATGTTC 584045 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 ||||| ||||| || ||||| || || | || | | || || | || | Sbjct 584044 TCCATAAAATCGAAGGGATTAGTCGAGCGGTAGACCTTGTCATTGCCTAAAGCGACAAGC 583985 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 || | ||| |||||||| || || || ||||| | | ||||| || | || Sbjct 583984 AAACGATCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTTCATCCCGAGCAGA 583925 Query 33193 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTAT-AAT 33251 | || || || | || ||||||||||| ||||| || ||||| ||| | | Sbjct 583924 GCACAAGGCAGGGCTTCTGTCAGAAATTCTTGCTCAATCTTAACAGCATCGACTATGACT 583865 Query 33252 AGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 33311 ||| ||| ||| | || || ||| | || || ||||| | || || || Sbjct 583864 GCCTCT-ACGAGTTCCTTGCTGGGCCGATTCTTCAAGTGAGAAAACAATAGGCAGGCAAA 583806 Query 33312 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 33371 ||| || || |||||||| | || || || ||||| || || || |||||||| Sbjct 583805 ATCAGTATGGAGGCCCTCGTCACGCGAGATGAGCTCATTGGAGAAAGTCAGACCGGGCAT 583746 Query 33372 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTC 33431 || |||||||| || ||||| || ||||| ||||| | ||| |||||||| ||||| Sbjct 583745 CAGACCACGCTTCTTGAGCCAGAAAATGGAGGCGAAAGCACCACTGAAGAAGATACCTTC 583686 Query 33432 TACTGCAGCAAAGGCAATAAG 33452 || || || |||||||| || Sbjct 583685 AACGGCGGCGAAGGCAATGAG 583665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946390168640