Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq45 125 7e-24 seq10 111 2e-19 >seq45 Length=386842 Score = 125 bits (138), Expect = 7e-24 Identities = 158/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 26779 TTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCG 26838 |||| || || |||||||||| | |||||| |||| | || || |||||| || | Sbjct 238338 TTGTCAAGACCCTAACTGGAAAGACCATCACCCTCGAGGTGGAGTCCTCCGACACTATTG 238279 Query 26839 AGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCA 26898 | | ||||| ||||| ||||||||||| || |||||||| || || | | | Sbjct 238278 ACAATGTCAAGTCGAAGATCCAGGACAAAGAAGGCATCCCTCCCGACCAGCAGCGTTTGA 238219 Query 26899 TTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAG 26958 | | || |||||| ||||||||||| | ||| | |||||||||| ||||| ||||| | Sbjct 238218 TCTTCGCCGGCAAGCAACTCGAAGACGGCCGAACCCTCAGCGACTACAACATCCAAAAGG 238159 Query 26959 AATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||| ||| |||| || |||||| | ||| | || || Sbjct 238158 AATCCACTCTCCACCTTGTCCTGCGCCTTCGTGGTGG 238122 >seq10 Length=1111123 Score = 111 bits (122), Expect = 2e-19 Identities = 332/505 (66%), Gaps = 17/505 (3%) Strand=Plus/Plus Query 148242 CCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTTTAAA 148301 || ||||||||||| || ||||| ||| |||| || || | ||| ||| |||| | | Sbjct 724324 CCCTCGGCCTCGTACTTCTCGTAGAGGGCCTCAAACTCATCGCCGTAGACATCGGCAAGA 724383 Query 148302 CCGGGACACTCGTCGGGGCACATCAATGACCA-TTTCCCTCCTGTCTTTACCCTCTTCAT 148360 ||||||||||||| ||||||||| | || ||| | || | || | | || | |||||| Sbjct 724384 CCGGGACACTCGTTGGGGCACATTAGTGTCCAGGTACCGTTCT-TTTCAACACGCTTCAT 724442 Query 148361 AAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGC-----CTTCATATCCTCG 148415 || |||||||| |||| | ||||| | || || || || |||| |||| | Sbjct 724443 GAAGAGATCAGGGATCCAAAGGGCAAGGAAGAGGTCACGGGCACGAACTTC--CTCCTTG 724500 Query 148416 GCACCCATATTGCGCTTTAGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTCGATG 148475 | | || ||| |||||||| || || || || | |||||| ||||| | | Sbjct 724501 CCGTGGTTCTTTCGC---AGATCCAAGAACTCGAAGACATCCGAGTGCCATGGCTCAAGG 724557 Query 148476 TATACGGTCATGGCGCC---TTTCCTTTTACCTCCTTGATCGACATGGCGTAGCATGCTA 148532 || | | | ||||| | | | ||||| ||||||||||| | || || | Sbjct 724558 TAGATAGCAAAAGCGCCAGGTCGCTTGTTACCACCTTGATCGACGTAACGGGCTGTGTTG 724617 Query 148533 TTAAAAACACGCAATGCAGGTCCCAATCCCGCCGCAGTTCCGTTTGTGGATTCAATTTTA 148592 || || ||||| || || | | || | || ||||| || |||| | | Sbjct 724618 TTGAAGACACGTAACATGGGAACGATACCATTTGATGTACCGTTGGTACCGGCAATGTAA 724677 Query 148593 CTATTGGTGGCGCGAATTTGAGTG-ACATTCAGGCCGATGCCGCCTCCGTGTTTAGATAT 148651 |||||||| || | ||| |||||||||||||| || || | ||| || || Sbjct 724678 GAGCCCGTGGCGCGGATACG-GTGTACATTCAGGCCGATTCCTCCGGCCATTTTGGAAAT 724736 Query 148652 CATGGCACAATCGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTTGAATGTTAAG 148711 ||| ||||| ||||| || | ||||| || | ||| || || || | |||| | Sbjct 724737 CATCGCACATGTCTTGAGAGTGTCGTAGATACCTTCAATGCTATCATCCTTCATGTCGAC 724796 Query 148712 CAGGTAGCACGATGACATTTGAGGC 148736 || | |||| || |||||||||||| Sbjct 724797 CAAGAAGCAAGACGACATTTGAGGC 724821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478661777738880