Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq10 183 4e-41 >seq10 Length=1111123 Score = 183 bits (202), Expect = 4e-41 Identities = 472/715 (66%), Gaps = 12/715 (2%) Strand=Plus/Plus Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 || ||||| || || | |||| | | || || ||||| || | || ||||| | | | Sbjct 724354 TCAAACTCATCGCCGTAGACATCGGCAAGACCGGGACACTCGTTGGGGCACATTAGTGTC 724413 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112 || |||| | | || || ||||| ||||||||||| |||||||| || | || Sbjct 724414 CAGGTACCGTTCTTTTCAACACGCTTCATGAAGAGATCAGGGATCCAAAGGGCAAGGAAG 724473 Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63172 || || | || | | |||||| || || |||||| ||||| | |||| | | Sbjct 724474 AGGTCACGGGCACGAACTTCCTCCTTGCCGTGGTTCTTTCGCAGATCCAAGAACTCGAAG 724533 Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63232 | ||| || ||||| || || | ||| || || | | | ||||| || ||||| || || Sbjct 724534 ACATCCGAGTGCCATGGCTCAAGGTAGATAGCAAAAGCGCCAGGTCGCTTGTTACCACCT 724593 Query 63233 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 63292 ||||| | ||| | || ||||| || | || | ||||| |||| |||||||| ||| Sbjct 724594 TGATCGACGTAACGGGCTGTGTTGTTGAAGACACGTAACATGGGAACGATACCATTTGAT 724653 Query 63293 GTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATA----TTACTAATTGATAG 63348 ||||| ||||| || | || || || |||| || ||| ||| ||| || Sbjct 724654 GTACCGTTGGTACCGGCAATGTAAGAGCCCGTGGCGCGGATACGGTGTAC--ATT--CAG 724709 Query 63349 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCC 63408 || ||||| || |||||||| || || | || ||| || | || || ||||| || Sbjct 724710 GCCGATTCCTCCGGCCATTTTGGAAATCATCGCACATGTCTTGAGAGTGTCGTAGATACC 724769 Query 63409 CTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT 63468 || || ||||||||| |||||| | | || || |||||||| | | || Sbjct 724770 TTCAATGCTATCATCCTTCATGTCGACCAAGAAGCAAGACGACATTTGAGGCTGTGGTGT 724829 Query 63469 TCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTA 63528 ||| ||||| || | ||||||||||| || || || | || || | || ||||| Sbjct 724830 TCCGGCATTGAACAGCGTAGGAGAAGCATGTGTGAAGTACTTGAGGGACATGAGGTTGTA 724889 Query 63529 CGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACAT 63588 ||||| | || || | || | ||| || || || |||||||| | ||| Sbjct 724890 GGTCTCGAGGACTTTCTCAACATTATCTCCCCAAATGCCAACAGCCACACGCATAATCAT 724949 Query 63589 GTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGT 63648 ||| || ||||| || || ||||| ||| || ||||| | || ||| || | || Sbjct 724950 GTGTTGGGGTCTCTCGACAATCTTTCCGTTAATCTTCAAGAGATATGATCGCTCTAGCGT 725009 Query 63649 TTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGT 63701 |||||||| || || | ||| ||||| || || || || | ||| |||||| Sbjct 725010 CTTAAAACCGAAGTATTGGTAGTTGAAA--TCGCGGTCATATACAATGGCCGAGT 725062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631176278400