Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq45 109 5e-19 >seq45 Length=386842 Score = 109 bits (120), Expect = 5e-19 Identities = 144/198 (73%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 25006 TATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTA 25065 || |||| ||||| | || || || ||||||| |||| |||||||| || ||||||| Sbjct 238341 TAGTTGTCAAGACCCTAACTGGAAAGACCATCACCCTCGAGGTGGAGTCCTCCGACACTA 238282 Query 25066 TCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCG 25123 | || || || ||| || ||| ||||||||||| || || || ||||| ||||| Sbjct 238281 TTGA--CAATGTCAAGTCGAAGATCCAGGACAAAGAAGGCATCCCTCCCGACCAGCAGCG 238224 Query 25124 GATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCA 25183 | || || |||||||| ||| | ||||| | || || | |||| ||||| || || Sbjct 238223 TTTGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGAACCCTCAGCGACTACAACATCCA 238164 Query 25184 AAAAGAATCCACGCTACA 25201 ||| |||||||| || || Sbjct 238163 AAAGGAATCCACTCTCCA 238146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327450756760