Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq28 96.9 4e-15 >seq28 Length=668342 Score = 96.9 bits (106), Expect = 4e-15 Identities = 154/220 (70%), Gaps = 6/220 (3%) Strand=Plus/Minus Query 93084 ACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGA 93143 ||| || ||| ||||| || ||||| | || ||||| || || || | ||||||| || Sbjct 583821 ACAATAGGCAGGCAAAATCAGTATGGAGGCCCTCGTCACGCGAGATGAGCTCATTGGAGA 583762 Query 93144 ATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAG 93203 | || | ||| || | ||| || || ||||||||||| || || || || ||| |||| Sbjct 583761 AAGTCAGACCGGGCATCAGACCACGCTTCTTGAGCCAGAAAATGGAGGCGAAAGCACCAC 583702 Query 93204 aaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAAT 93263 || || |||||||| ||||| || || || | | ||||| ||| ||| | || | Sbjct 583701 TGAAGAAGATACCTTCAACGGCGGCGAAGGCAATGAGACGTTGGGCGAAA---GTAGAGT 583645 Query 93264 TAC---TGCTGATCCATTTTAAAGCCCAATCGGCtttttt 93300 | | | ||||||| || | |||||| || || || || Sbjct 583644 TGCGGTCGGTGATCCACTTCAGAGCCCAGTCAGCCTTCTT 583605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860076080960