Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq21 118 9e-22 seq45 98.7 8e-16 seq25 89.7 4e-13 >seq21 Length=742638 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | || ||||| || |||| || || ||||| | | | Sbjct 187869 ATGCAGATTTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTCGAGGTGGAGTCTAGC 187928 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || || || ||||||||||| || || || || || Sbjct 187929 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAG 187988 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | |||||| ||| ||| ||||||| |||||| Sbjct 187989 CAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACCCTCTCCGACTACAAC 188048 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || |||| | || | || |||| |||| || ||| Sbjct 188049 ATCCAGAAGGAGAGCACCCTCCACCTCGTGCTGCGTCTGCGTGGTGGT 188096 >seq45 Length=386842 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || || || || || |||| | ||||| ||| || | Sbjct 237892 ATGCAGATCTTCGTCAAGACATTGACGGGCAAGACCATCACATTGGAAGTAGAATCCTCA 237833 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || || ||||||||||| |||||||| || || || Sbjct 237832 GACACCATTGACAACGTGAAGAGCAAGATCCAAGACAAGGAAGGTATTCCTCCTGACCAG 237773 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | |||||| |||||| | |||||||||| Sbjct 237772 CAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGATGGTCGCACCCTGAGCGATTACAAC 237713 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 || || || || || ||| | || || || Sbjct 237712 ATCCAGAAGGAGTCTACCCTCCACTTGGT 237684 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||| | ||||| || || |||| | || || ||| | | Sbjct 238120 ATGCAAATCTTCGTCAAGACTCTTACCGGAAAGACCATCACCTTGGAGGTCGAATCATCA 238061 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || ||||||||||||||||| || || || || || || Sbjct 238060 GACACGATCGACAATGTGAAGAGCAAAATTCAAGACAAGGAAGGCATCCCTCCTGACCAG 238001 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| || || ||| ||||||| || || | ||| |||||| Sbjct 238000 CAGCGACTCATCTTTGCTGGTAAGCAGCTAGAGGACGGACGAACTCTAAGCGACTACAAC 237941 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || || | || || || | || ||||| || ||| Sbjct 237940 ATTCAGAAGGAGTCTACGCTGCACTTGGTGCTTCGGTTGCGTGGTGGT 237893 >seq25 Length=698551 Score = 89.7 bits (98), Expect = 4e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 22220 TGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCG 22279 |||| || || || || || | || || || || |||| || || || || || ||| Sbjct 513634 TGCAGATCTTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCG 513693 Query 22280 ATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAAC 22339 | ||| | ||| || |||| || || || ||||||||||| || || || ||||| | Sbjct 513694 ACACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCAGC 513753 Query 22340 AACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACA 22399 | ||||| || || ||||| || ||| | || || ||| ||| |||| || ||||||| Sbjct 513754 AGCGTCTCATCTTCGCCGGAAAGCAGCTTGAAGACGGCCGAACCCTCTCAGACTACAACA 513813 Query 22400 TTCAAAA 22406 | || || Sbjct 513814 TCCAGAA 513820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727467994760