Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq66 91.5 3e-13 seq43 86.0 1e-11 seq8 86.0 1e-11 seq6 86.0 1e-11 >seq66 Length=239292 Score = 91.5 bits (100), Expect = 3e-13 Identities = 95/122 (78%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA- 280760 |||||||||| || ||||| ||||| || ||| ||||| | ||| | ||| Sbjct 127371 CTCACTCTCGTATGAAGGGTCTGTCTGGTGGTCAGCGTGTCAAGGTCGTCCTGTCAGCTT 127312 Query 280761 GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGC 280820 |||| |||||||| |||||| ||||||||||||||||||| || |||||||||||||| Sbjct 127311 GCTC-GTGGCAACGACCTCACTTGATCGTTCTCGACGAGCCCACTAACTATCTGGACCGT 127253 Query 280821 GA 280822 || Sbjct 127252 GA 127251 >seq43 Length=397998 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| | Sbjct 136427 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 136368 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 136367 CCCGCATCGGGC 136356 >seq8 Length=1266818 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| | Sbjct 631301 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 631360 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 631361 CCCGCATCGGGC 631372 >seq6 Length=1413877 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| | Sbjct 860795 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 860736 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 860735 CCCGCATCGGGC 860724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835430407464