Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq45 185 2e-41 seq21 161 2e-34 seq25 143 5e-29 seq10 86.0 1e-11 >seq45 Length=386842 Score = 185 bits (204), Expect = 2e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||||||| || || ||||| || |||||||| |||||| Sbjct 237666 CCGCCACGAAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCGCTC 237725 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| ||||| | || ||||| || ||| Sbjct 237726 AGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGA 237785 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||||||||| ||||| ||| ||| || |||||||||| ||||||||| Sbjct 237786 ATACCTTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCAATGGTGTCTGAGGATTCTACT 237845 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||| || ||||| | ||||||||||| |||||||| Sbjct 237846 TCCAATGTGATGGTCTTGCCCGTCAATGTCTTGACGAAGATCTGCAT 237892 Score = 178 bits (196), Expect = 2e-39 Identities = 178/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || |||| |||||||| || ||| ||| || |||||||| || ||||| Sbjct 238405 CCACCGCGCAGACGCAGGACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 238464 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| | ||||| |||||||| || | | ||| ||||| || ||| Sbjct 238465 AAGGTGCGACCATCTTCAAGTTGCTTTCCGGCGAAAATCAAGCGTTGCTGGTCAGGAGGA 238524 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||||||||| |||||||| | |||||| |||||||| || | || || || Sbjct 238525 ATACCTTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCGGAGGACTCCACC 238584 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 ||||||||||| || || || ||||| ||||||||||| |||||||| ||| Sbjct 238585 TCCAAGGTGATAGTCTTACCGGTGAGAGTCTTGACGAAGATCTGCATGATG 238635 Score = 174 bits (192), Expect = 3e-38 Identities = 166/210 (79%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| ||||| ||||| || || ||||| || ||| || || | || || ||| Sbjct 237912 ACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGCTTAGAGTTCGTCCGTCCTCT 237971 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||| || || || ||||||| || ||||| || || |||||||||||||||||| Sbjct 237972 AGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGA 238031 Query 68373 ATCTTTGC-CTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTT 68431 || ||||| ||| || ||||| ||||||| |||||| || |||||||||||||| || Sbjct 238032 AT-TTTGCTCTTCACATTGTCGATCGTGTCTGATGATTCGACCTCCAAGGTGATGGTCTT 238090 Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || ||||||||||| || ||||| Sbjct 238091 TCCGGTAAGAGTCTTGACGAAGATTTGCAT 238120 Score = 145 bits (160), Expect = 1e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || |||||||||| || | ||| || ||||| || ||||||||||| || ||| | Sbjct 238122 CCACCACGAAGGCGCAGGACAAGGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGCTG 238181 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | ||||| |||||||| || | | || |||||||| || Sbjct 238182 AGGGTTCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGAGGG 238241 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||| ||||| || ||||| | |||||| || || ||||| | || || || Sbjct 238242 ATGCCTTCTTTGTCCTGGATCTTCGACTTGACATTGTCAATAGTGTCGGAGGACTCCACC 238301 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGAC 68449 || | ||||||||| ||||| || ||||||||||| Sbjct 238302 TCGAGGGTGATGGTCTTTCCAGTTAGGGTCTTGAC 238336 >seq21 Length=742638 Score = 161 bits (178), Expect = 2e-34 Identities = 176/231 (76%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| || | ||| || ||| ||| || |||||||| || |||||| Sbjct 188095 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 188036 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| || || | || ||||| || || Sbjct 188035 AGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGGGGG 187976 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 || || |||||||| || ||||| | |||||| ||||||||||| ||| || || || Sbjct 187975 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTC-GCTAGACTCCAC 187917 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTAT 68464 || | |||||| || || |||||||||||||||||||| |||||||| || Sbjct 187916 CTCGAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCATGAT 187866 >seq25 Length=698551 Score = 143 bits (158), Expect = 5e-29 Identities = 144/187 (77%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || || ||||| || | || ||||| | |||||| |||||||| ||| Sbjct 513820 TTCTGGATGTTGTAGTCTGAGAGGGTTCGGCCGTCTTCAAGCTGCTTTCCGGCGAAGATG 513761 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || || || || || ||||| |||||||| || ||||| |||||| ||| Sbjct 513760 AGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 513701 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAAT 68453 |||||||| | || || || || | ||||||||| || |||||||||||||| ||||| Sbjct 513700 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAG 513641 Query 68454 ATCTGCA 68460 ||||||| Sbjct 513640 ATCTGCA 513634 >seq10 Length=1111123 Score = 86.0 bits (94), Expect = 1e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 195992 TGGGTCGTCTTTGACGAAATCCACTACATGTCCGACGATGCGCGTGGTACCGTGTGGGAA 196051 |||||||| || || || |||||||||||| |||| | |||||||| |||||||| Sbjct 329416 TGGGTCGTATTCGATGAGATCCACTACATGCGCGACAAGTCGCGTGGTGTTGTGTGGGAG 329357 Query 196052 GAAAGCCTTATCCTCATCCCGGATACCATCCGCTGTGTCTTTTTGTCCGCGACTGTTCCC 196111 |||| ||||||| | || |||| | || | || ||| ||||||| ||| |||| Sbjct 329356 GAAACTATTATCCTTCTACCAGATAAAGTGCGATACGTGTTTCTGTCCGCTACTATTCCG 329297 Query 196112 AACGCCCGTGACTTTGC 196128 |||||| | | ||||| Sbjct 329296 AACGCCTTTCAGTTTGC 329280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621201890880