Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq45 140 3e-28 seq25 89.7 4e-13 >seq45 Length=386842 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 |||||||| || | | || || || | ||||| || || || ||||||||||||||| Sbjct 237666 CCGCCACGAAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCGCTC 237725 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || ||| ||| || || || ||||||||| ||||||||||||| ||||| |||||| Sbjct 237726 AGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGA 237785 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||| ||||| ||||| || | | |||| |||||| | |||||| || Sbjct 237786 ATACCTTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCAATGGTGTCTGAGGATTCTACT 237845 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| || | || ||||| |||| || || || || |||||||| Sbjct 237846 TCCAATGTGATGGTCTTGCCCGTCAATGTCTTGACGAAGATCTGCAT 237892 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| | | | || || || | |||||| || || ||||||||||| ||| Sbjct 237891 ATACCACCACGCAACCGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCG 237950 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || | ||| || || || || || |||||||| ||||||| ||||| ||||| ||| Sbjct 237951 CTTAGAGTTCGTCCGTCCTCTAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCAGGA 238010 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| ||||| ||| || || | | || | ||||| | |||||| Sbjct 238011 GGGATGCCTTCCTTGTCTTGAATTTTGCTCTTCACATTGTCGATCGTGTCTGATGATTCG 238070 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | || || ||||| ||||| || || || || ||||| Sbjct 238071 ACCTCCAAGGTGATGGTCTTTCCGGTAAGAGTCTTGACGAAGATTTGCAT 238120 Score = 104 bits (114), Expect = 2e-17 Identities = 155/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | || || | || | || ||||| ||||| |||||||| ||| Sbjct 238119 ATACCACCACGAAGGCGCAGGACAAGGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCG 238178 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || | || || ||||| ||||| || || ||| |||| | |||||| ||||| ||| Sbjct 238179 CTGAGGGTTCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGA 238238 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||||||||| ||||| || | | |||| ||||||| ||| || Sbjct 238239 GGGATGCCTTCTTTGTCCTGGATCTTCGACTTGACATTGTCAATAGTGTCGGAGGACTCC 238298 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 114372 || || | ||| | || || || || || || || |||| Sbjct 238299 ACCTCGAGGGTGATGGTCTTTCCAGTTAGGGTCTTGACAA 238338 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || || |||||||| ||| || || ||| |||||||||||| || || ||| | Sbjct 238441 TCCTTCTGGATGTTGTAGTCGGACAAGGTGCGACCATCTTCAAGTTGCTTTCCGGCGAAA 238500 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || | || || ||||| |||||||| ||||| ||||| |||||| || | | Sbjct 238501 ATCAAGCGTTGCTGGTCAGGAGGAATACCTTCCTTGTCCTGAATCTTCGACTTGACATTG 238560 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | ||| |||| ||| || || |||| ||| | || || ||||| ||||| || || Sbjct 238561 TCGATGGTATCGGAGGACTCCACCTCCAAGGTGATAGTCTTACCGGTGAGAGTCTTGACG 238620 Query 114372 AAAATCTGCATG 114383 || ||||||||| Sbjct 238621 AAGATCTGCATG 238632 >seq25 Length=698551 Score = 89.7 bits (98), Expect = 4e-13 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287 |||||||| || || || ||| ||||||||||||| || ||||| || ||||| || ||| Sbjct 513787 TCTTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTG 513728 Query 114288 TCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACC 114347 || ||||| || | | || | |||||||| ||| ||||| || | ||| | Sbjct 513727 TCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATG 513668 Query 114348 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCA 114381 || ||||| || || || || || || ||||||| Sbjct 513667 GTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCA 513634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420133867479648