Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq21 145 2e-29 seq45 125 2e-23 seq28 109 1e-18 >seq21 Length=742638 Score = 145 bits (160), Expect = 2e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| || | ||||| || || ||||| || ||||||| | Sbjct 188095 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 188036 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || ||||||||||||||||| || | ||| Sbjct 188035 AGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGGGGG 187976 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||| || || |||||||| || | || || || || || | ||||| || || || Sbjct 187975 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTAGACTCCACC 187916 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTAT 288476 ||||| ||||| ||||| || || || ||||||||||| |||||||| || Sbjct 187915 TCGAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCATGAT 187866 >seq45 Length=386842 Score = 125 bits (138), Expect = 2e-23 Identities = 170/236 (72%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| |||||||| || | || || | || | ||||| || || ||||| || |||| Sbjct 238401 CATG-CCACCGCGCAGACGCAGGACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGT 238459 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| | ||||| || ||||| | ||| ||||| ||||| |||| || || || | Sbjct 238460 CGGACAAGGTGCGACCATCTTCAAGTTGCTTTCCGGCGAAAATCAAGCGTTGCTGGTCAG 238519 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 || || ||||| || ||||| || |||| || || || || || | |||| || | Sbjct 238520 GAGGAATACCTTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCGGAGGACT 238579 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 | || || | ||||| ||||| ||||| |||||||||||||| |||||||| ||| Sbjct 238580 CCACCTCCAAGGTGATAGTCTTACCGGTGAGAGTCTTGACGAAGATCTGCATGATG 238635 Score = 105 bits (116), Expect = 2e-17 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || ||| || ||||| || || || | || || || |||||| Sbjct 237702 TCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAAG 237761 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTT 288401 || |||||||| || | || || ||||| || || ||||| || ||| |||||||| Sbjct 237762 ATGAGACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCTTGGATCTT-GCTCTTCACGTT 237820 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || ||||||||||| | ||||| ||||| || |||| |||||||| Sbjct 237821 GTCAATGGTGTCTGAGGATTCTACTTCCAATGTGATGGTCTTGCCCGTCAATGTCTTGAC 237880 Query 288462 GAATATCTGCAT 288473 ||| |||||||| Sbjct 237881 GAAGATCTGCAT 237892 Score = 100 bits (110), Expect = 7e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || |||||| || || |||||||| |||| || || || || ||| Sbjct 237930 TCCTTCTGAATGTTGTAGTCGCTTAGAGTTCGTCCGTCCTCTAGCTGCTTACCAGCAAAG 237989 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTT 288401 || || ||||| || | ||||| ||||| || || || ||||| ||| ||||| || Sbjct 237990 ATGAGTCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGAATTTT-GCTCTTCACATT 238048 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || ||||| || || | ||||| ||||| ||||| ||||||||||| Sbjct 238049 GTCGATCGTGTCTGATGATTCGACCTCCAAGGTGATGGTCTTTCCGGTAAGAGTCTTGAC 238108 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 238109 GAAGATTTGCAT 238120 >seq28 Length=668342 Score = 109 bits (120), Expect = 1e-18 Identities = 130/174 (75%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 269140 CCATGTTCTATGATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCT 269199 || ||| || || |||| ||||| ||| | |||||||| || || ||||| ||||| || Sbjct 583917 CCTTGTGCTCTGCTCGGGATGAACGCCAACCTCATGAAGCAGTACATCGAGTTCGTCGCC 583976 Query 269200 GATCGTAT-CTTCACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGC 269258 |||||| | ||| || | | || |||| || || ||| |||| |||||||||| Sbjct 583977 GATCGTTTGCTTGTCG-CTTTAGGCAATGACAAGGTCTACCGCTCGACTAATCCCTTCGA 584035 Query 269259 CTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGT 269312 |||||||| || ||||||| || ||||| ||||||||||||||||| || Sbjct 584036 TTTTATGGAGAACATCTCGCTCGGTGGCAAGACAAACTTCTTCGAAAAGCGCGT 584089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179652828110512